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AQP7 (aquaporin 7)

Identity

Alias (NCBI)AQP7L
AQPap
GLYCQTL
HGNC (Hugo) AQP7
HGNC Alias symbAQP9
AQPap
HGNC Previous nameAQP7L
LocusID (NCBI) 364
Atlas_Id 56897
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 33383191 and ends at 33402568 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)AQP7   640
Cards
Entrez_Gene (NCBI)AQP7  364  aquaporin 7
AliasesAQP7L; AQPap; GLYCQTL
GeneCards (Weizmann)AQP7
Ensembl hg19 (Hinxton)ENSG00000165269 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165269 [Gene_View]  ENSG00000165269 [Sequence]  chr9:33383191-33402568 [Contig_View]  AQP7 [Vega]
ICGC DataPortalENSG00000165269
TCGA cBioPortalAQP7
AceView (NCBI)AQP7
Genatlas (Paris)AQP7
WikiGenes364
SOURCE (Princeton)AQP7
Genetics Home Reference (NIH)AQP7
Genomic and cartography
GoldenPath hg38 (UCSC)AQP7  -     chr9:33383191-33402568 -  9p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AQP7  -     9p13.3   [Description]    (hg19-Feb_2009)
GoldenPathAQP7 - 9p13.3 [CytoView hg19]  AQP7 - 9p13.3 [CytoView hg38]
ImmunoBaseENSG00000165269
genome Data Viewer NCBIAQP7 [Mapview hg19]  
OMIM602974   614411   
Gene and transcription
Genbank (Entrez)AB006190 AK055744 AK294028 AK297860 AK297885
RefSeq transcript (Entrez)NM_001170 NM_001318156 NM_001318157 NM_001318158 NM_001376191 NM_001376192 NM_001376193
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AQP7
Alternative Splicing GalleryENSG00000165269
Gene ExpressionAQP7 [ NCBI-GEO ]   AQP7 [ EBI - ARRAY_EXPRESS ]   AQP7 [ SEEK ]   AQP7 [ MEM ]
Gene Expression Viewer (FireBrowse)AQP7 [ Firebrowse - Broad ]
GenevisibleExpression of AQP7 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)364
GTEX Portal (Tissue expression)AQP7
Human Protein AtlasENSG00000165269-AQP7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14520   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14520  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14520
Splice isoforms : SwissVarO14520
PhosPhoSitePlusO14520
Domains : Interpro (EBI)Aquaporin-like    MIP   
Domain families : Pfam (Sanger)MIP (PF00230)   
Domain families : Pfam (NCBI)pfam00230   
Conserved Domain (NCBI)AQP7
DMDM Disease mutations364
Blocks (Seattle)AQP7
PDB (RSDB)6KXW    6N1G    6QZI    6QZJ   
PDB Europe6KXW    6N1G    6QZI    6QZJ   
PDB (PDBSum)6KXW    6N1G    6QZI    6QZJ   
PDB (IMB)6KXW    6N1G    6QZI    6QZJ   
Structural Biology KnowledgeBase6KXW    6N1G    6QZI    6QZJ   
SCOP (Structural Classification of Proteins)6KXW    6N1G    6QZI    6QZJ   
CATH (Classification of proteins structures)6KXW    6N1G    6QZI    6QZJ   
SuperfamilyO14520
Human Protein Atlas [tissue]ENSG00000165269-AQP7 [tissue]
Peptide AtlasO14520
IPIIPI00022359   IPI00514751   IPI00922688   IPI01012254   IPI00455220   IPI00383116   IPI00645813   IPI00514783   IPI00641429   
Protein Interaction databases
DIP (DOE-UCLA)O14520
IntAct (EBI)O14520
FunCoupENSG00000165269
BioGRIDAQP7
STRING (EMBL)AQP7
ZODIACAQP7
Ontologies - Pathways
QuickGOO14520
Ontology : AmiGOcytoplasm  lipid droplet  plasma membrane  plasma membrane  integral component of plasma membrane  cell-cell junction  cell cortex  water transport  water transport  urea transmembrane transporter activity  water channel activity  glycerol channel activity  glycerol channel activity  glycerol transport  glycerol transport  cytoplasmic vesicle membrane  urea transmembrane transport  
Ontology : EGO-EBIcytoplasm  lipid droplet  plasma membrane  plasma membrane  integral component of plasma membrane  cell-cell junction  cell cortex  water transport  water transport  urea transmembrane transporter activity  water channel activity  glycerol channel activity  glycerol channel activity  glycerol transport  glycerol transport  cytoplasmic vesicle membrane  urea transmembrane transport  
Pathways : KEGGPPAR signaling pathway   
NDEx NetworkAQP7
Atlas of Cancer Signalling NetworkAQP7
Wikipedia pathwaysAQP7
Orthology - Evolution
OrthoDB364
GeneTree (enSembl)ENSG00000165269
Phylogenetic Trees/Animal Genes : TreeFamAQP7
HOGENOMO14520
Homologs : HomoloGeneAQP7
Homology/Alignments : Family Browser (UCSC)AQP7
Gene fusions - Rearrangements
Fusion : QuiverAQP7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAQP7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AQP7
dbVarAQP7
ClinVarAQP7
MonarchAQP7
1000_GenomesAQP7 
Exome Variant ServerAQP7
GNOMAD BrowserENSG00000165269
Varsome BrowserAQP7
Genetic variants : HAPMAP364
Genomic Variants (DGV)AQP7 [DGVbeta]
DECIPHERAQP7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAQP7 
Mutations
ICGC Data PortalAQP7 
TCGA Data PortalAQP7 
Broad Tumor PortalAQP7
OASIS PortalAQP7 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDAQP7
BioMutasearch AQP7
DgiDB (Drug Gene Interaction Database)AQP7
DoCM (Curated mutations)AQP7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AQP7 (select a term)
intoGenAQP7
Cancer3DAQP7(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602974    614411   
Orphanet
DisGeNETAQP7
MedgenAQP7
Genetic Testing Registry AQP7
NextProtO14520 [Medical]
TSGene364
GENETestsAQP7
Target ValidationAQP7
Huge Navigator AQP7 [HugePedia]
snp3D : Map Gene to Disease364
BioCentury BCIQAQP7
ClinGenAQP7
Clinical trials, drugs, therapy
Protein Interactions : CTD364
Pharm GKB GenePA24925
Clinical trialAQP7
Miscellaneous
canSAR (ICR)AQP7 (select the gene name)
HarmonizomeAQP7
DataMed IndexAQP7
Probes
Litterature
PubMed61 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAQP7
EVEXAQP7
GoPubMedAQP7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 14 14:01:52 CEST 2020

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