Atlas of Genetics and Cytogenetics in Oncology and Haematology


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AQP7 (aquaporin 7)

Identity

Alias_namesAQP7L
Alias_symbol (synonym)AQP9
AQPap
Other aliasGLYCQTL
HGNC (Hugo) AQP7
LocusID (NCBI) 364
Atlas_Id 60446
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 33384948 and ends at 33402517 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AQP7   640
Cards
Entrez_Gene (NCBI)AQP7  364  aquaporin 7
AliasesAQP7L; AQP9; AQPap; GLYCQTL
GeneCards (Weizmann)AQP7
Ensembl hg19 (Hinxton)ENSG00000165269 [Gene_View]  chr9:33384948-33402517 [Contig_View]  AQP7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000165269 [Gene_View]  chr9:33384948-33402517 [Contig_View]  AQP7 [Vega]
ICGC DataPortalENSG00000165269
TCGA cBioPortalAQP7
AceView (NCBI)AQP7
Genatlas (Paris)AQP7
WikiGenes364
SOURCE (Princeton)AQP7
Genetics Home Reference (NIH)AQP7
Genomic and cartography
GoldenPath hg19 (UCSC)AQP7  -     chr9:33384948-33402517 -  9p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)AQP7  -     9p13.3   [Description]    (hg38-Dec_2013)
EnsemblAQP7 - 9p13.3 [CytoView hg19]  AQP7 - 9p13.3 [CytoView hg38]
Mapping of homologs : NCBIAQP7 [Mapview hg19]  AQP7 [Mapview hg38]
OMIM602974   614411   
Gene and transcription
Genbank (Entrez)AB006190 AK055744 AK294028 AK297860 AK297885
RefSeq transcript (Entrez)NM_001170
RefSeq genomic (Entrez)NC_000009 NC_018920 NG_027764 NT_008413 NW_004929342
Consensus coding sequences : CCDS (NCBI)AQP7
Cluster EST : UnigeneHs.455323 [ NCBI ]
CGAP (NCI)Hs.455323
Alternative Splicing GalleryENSG00000165269
Gene ExpressionAQP7 [ NCBI-GEO ]   AQP7 [ EBI - ARRAY_EXPRESS ]   AQP7 [ SEEK ]   AQP7 [ MEM ]
Gene Expression Viewer (FireBrowse)AQP7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)364
GTEX Portal (Tissue expression)AQP7
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14520   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14520  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14520
Splice isoforms : SwissVarO14520
PhosPhoSitePlusO14520
Domains : Interpro (EBI)Aquaporin-like    Aquaporin_7    MIP   
Domain families : Pfam (Sanger)MIP (PF00230)   
Domain families : Pfam (NCBI)pfam00230   
Conserved Domain (NCBI)AQP7
DMDM Disease mutations364
Blocks (Seattle)AQP7
SuperfamilyO14520
Human Protein AtlasENSG00000165269
Peptide AtlasO14520
HPRD04277
IPIIPI00022359   IPI00514751   IPI00922688   IPI01012254   IPI00455220   IPI00383116   IPI00645813   IPI00514783   IPI00641429   
Protein Interaction databases
DIP (DOE-UCLA)O14520
IntAct (EBI)O14520
FunCoupENSG00000165269
BioGRIDAQP7
STRING (EMBL)AQP7
ZODIACAQP7
Ontologies - Pathways
QuickGOO14520
Ontology : AmiGOcytoplasm  plasma membrane  plasma membrane  integral component of plasma membrane  cell-cell junction  generation of precursor metabolites and energy  water transport  excretion  cellular water homeostasis  urea transmembrane transporter activity  water channel activity  glycerol channel activity  glycerol transport  ion transmembrane transport  transmembrane transport  urea transmembrane transport  
Ontology : EGO-EBIcytoplasm  plasma membrane  plasma membrane  integral component of plasma membrane  cell-cell junction  generation of precursor metabolites and energy  water transport  excretion  cellular water homeostasis  urea transmembrane transporter activity  water channel activity  glycerol channel activity  glycerol transport  ion transmembrane transport  transmembrane transport  urea transmembrane transport  
Pathways : KEGGPPAR signaling pathway   
NDEx NetworkAQP7
Atlas of Cancer Signalling NetworkAQP7
Wikipedia pathwaysAQP7
Orthology - Evolution
OrthoDB364
GeneTree (enSembl)ENSG00000165269
Phylogenetic Trees/Animal Genes : TreeFamAQP7
HOVERGENO14520
HOGENOMO14520
Homologs : HomoloGeneAQP7
Homology/Alignments : Family Browser (UCSC)AQP7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAQP7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AQP7
dbVarAQP7
ClinVarAQP7
1000_GenomesAQP7 
Exome Variant ServerAQP7
ExAC (Exome Aggregation Consortium)AQP7 (select the gene name)
Genetic variants : HAPMAP364
Genomic Variants (DGV)AQP7 [DGVbeta]
DECIPHER (Syndromes)9:33384948-33402517  ENSG00000165269
CONAN: Copy Number AnalysisAQP7 
Mutations
ICGC Data PortalAQP7 
TCGA Data PortalAQP7 
Broad Tumor PortalAQP7
OASIS PortalAQP7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAQP7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAQP7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AQP7
DgiDB (Drug Gene Interaction Database)AQP7
DoCM (Curated mutations)AQP7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AQP7 (select a term)
intoGenAQP7
Cancer3DAQP7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602974    614411   
Orphanet
MedgenAQP7
Genetic Testing Registry AQP7
NextProtO14520 [Medical]
TSGene364
GENETestsAQP7
Huge Navigator AQP7 [HugePedia]
snp3D : Map Gene to Disease364
BioCentury BCIQAQP7
ClinGenAQP7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD364
Chemical/Pharm GKB GenePA24925
Clinical trialAQP7
Miscellaneous
canSAR (ICR)AQP7 (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAQP7
EVEXAQP7
GoPubMedAQP7
iHOPAQP7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:54:47 CET 2017

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