Atlas of Genetics and Cytogenetics in Oncology and Haematology


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AQP7P1 (aquaporin 7 pseudogene 1)

Identity

Other aliasbA251O17.3
HGNC (Hugo) AQP7P1
LocusID (NCBI) 375719
Atlas_Id 60447
Location 9q13  [Link to chromosome band 9q13]
Location_base_pair Starts at 63315243 and ends at 63334520 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AQP7P1 (9q13) / RBFOX2 (22q12.3)AQP7P1 (9q13) / TSPO (22q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AQP7P1   32048
Cards
Entrez_Gene (NCBI)AQP7P1  375719  aquaporin 7 pseudogene 1
AliasesbA251O17.3
GeneCards (Weizmann)AQP7P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:63315243-63334520 [Contig_View]  AQP7P1 [Vega]
TCGA cBioPortalAQP7P1
AceView (NCBI)AQP7P1
Genatlas (Paris)AQP7P1
WikiGenes375719
SOURCE (Princeton)AQP7P1
Genetics Home Reference (NIH)AQP7P1
Genomic and cartography
GoldenPath hg38 (UCSC)AQP7P1  -     chr9:63315243-63334520 -  9q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AQP7P1  -     9q13   [Description]    (hg19-Feb_2009)
EnsemblAQP7P1 - 9q13 [CytoView hg19]  AQP7P1 - 9q13 [CytoView hg38]
Mapping of homologs : NCBIAQP7P1 [Mapview hg19]  AQP7P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128231 BC070322 BC071803
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)nih.oo6/projects/CCDS/CcdsBrowse.cgi?REQUEST=GENE&DATA=AQP7P1&ORGANISM=9606&BUILDS=CURRENTBUILDS TARGET=CCDS>AQP7P1
Cluster EST : UnigeneHs.658215 [ NCBI ]
CGAP (NCI)Hs.658215
Gene ExpressionAQP7P1 [ NCBI-GEO ]   AQP7P1 [ EBI - ARRAY_EXPRESS ]   AQP7P1 [ SEEK ]   AQP7P1 [ MEM ]
Gene Expression Viewer (FireBrowse)AQP7P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)375719
GTEX Portal (Tissue expression)AQP7P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AQP7P1
DMDM Disease mutations375719
Blocks (Seattle)AQP7P1
IPIIPI00970809   
Protein Interaction databases
BioGRIDAQP7P1
STRING (EMBL)AQP7P1
ZODIACAQP7P1
Ontologies - Pathways
Huge Navigator AQP7P1 [HugePedia]
snp3D : Map Gene to Disease375719
BioCentury BCIQAQP7P1
ClinGenAQP7P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD375719
Chemical/Pharm GKB GenePA142672591
Clinical trialAQP7P1
Miscellaneous
canSAR (ICR)AQP7P1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAQP7P1
EVEXAQP7P1<-TR>
GoPubMedAQP7P1
iHOPAQP7P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:19:20 CET 2017

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