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AQP7P3 (aquaporin 7 pseudogene 3)

Identity

Alias_symbol (synonym)AQPap-3
Other alias
HGNC (Hugo) AQP7P3
LocusID (NCBI) 441432
Atlas_Id 60448
Location 9p11.2  [Link to chromosome band 9p11]
Location_base_pair Starts at 40463758 and ends at 40498781 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AQP7P3   31976
Cards
Entrez_Gene (NCBI)AQP7P3  441432  aquaporin 7 pseudogene 3
AliasesAQPap-3
GeneCards (Weizmann)AQP7P3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:40463758-40498781 [Contig_View]  AQP7P3 [Vega]
TCGA cBioPortalAQP7P3
AceView (NCBI)AQP7P3
Genatlas (Paris)AQP7P3
WikiGenes441432
SOURCE (Princeton)AQP7P3
Genetics Home Reference (NIH)AQP7P3
Genomic and cartography
GoldenPath hg38 (UCSC)AQP7P3  -     chr9:40463758-40498781 -  9p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AQP7P3  -     9p11.2   [Description]    (hg19-Feb_2009)
EnsemblAQP7P3 - 9p11.2 [CytoView hg19]  AQP7P3 - 9p11.2 [CytoView hg38]
Mapping of homologs : NCBIAQP7P3 [Mapview hg19]  AQP7P3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC052332
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AQP7P3
Cluster EST : UnigeneHs.743215 [ NCBI ]
CGAP (NCI)Hs.743215
Gene ExpressionAQP7P3 [ NCBI-GEO ]   AQP7P3 [ EBI - ARRAY_EXPRESS ]   AQP7P3 [ SEEK ]   AQP7P3 [ MEM ]
Gene Expression Viewer (FireBrowse)AQP7P3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441432
GTEX Portal (Tissue expression)AQP7P3
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NL99   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NL99  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NL99
Splice isoforms : SwissVarA6NL99
PhosPhoSitePlusA6NL99
Domains : Interpro (EBI)Aquaporin-like    Aquaporin_7    MIP   
Domain families : Pfam (Sanger)MIP (PF00230)   
Domain families : Pfam (NCBI)pfam00230   
Conserved Domain (NCBI)AQP7P3
DMDM Disease mutations441432
Blocks (Seattle)AQP7P3
SuperfamilyA6NL99
Peptide AtlasA6NL99
HPRD17406
IPIIPI00878464   
Protein Interaction databases
DIP (DOE-UCLA)A6NL99
IntAct (EBI)A6NL99
BioGRIDAQP7P3
STRING (EMBL)AQP7P3
ZODIACAQP7P3
Ontologies - Pathways
QuickGOA6NL99
Ontology : AmiGOtransporter activity  transport  integral component of membrane  extracellular exosome  
Ontology : EGO-EBItransporter activity  transport  integral component of membrane  extracellular exosome  
NDEx NetworkAQP7P3
Atlas of Cancer Signalling NetworkAQP7P3
Wikipedia pathwaysAQP7P3
Orthology - Evolution
OrthoDB441432
Phylogenetic Trees/Animal Genes : TreeFamAQP7P3
HOVERGENA6NL99
HOGENOMA6NL99
Homologs : HomoloGeneAQP7P3
Homology/Alignments : Family Browser (UCSC)AQP7P3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAQP7P3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AQP7P3
dbVarAQP7P3
ClinVarAQP7P3
1000_GenomesAQP7P3 
Exome Variant ServerAQP7P3
ExAC (Exome Aggregation Consortium)AQP7P3 (select the gene name)
Genetic variants : HAPMAP441432
Genomic Variants (DGV)AQP7P3 [DGVbeta]
DECIPHERAQP7P3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAQP7P3 
Mutations
ICGC Data PortalAQP7P3 
TCGA Data PortalAQP7P3 
Broad Tumor PortalAQP7P3
OASIS PortalAQP7P3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDAQP7P3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AQP7P3
DgiDB (Drug Gene Interaction Database)AQP7P3
DoCM (Curated mutations)AQP7P3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AQP7P3 (select a term)
intoGenAQP7P3
Cancer3DAQP7P3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenAQP7P3
Genetic Testing Registry AQP7P3
NextProtA6NL99 [Medical]
TSGene441432
GENETestsAQP7P3
Target ValidationAQP7P3
Huge Navigator AQP7P3 [HugePedia]
snp3D : Map Gene to Disease441432
BioCentury BCIQAQP7P3
ClinGenAQP7P3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441432
Chemical/Pharm GKB GenePA142672593
Clinical trialAQP7P3
Miscellaneous
canSAR (ICR)AQP7P3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAQP7P3
EVEXAQP7P3
GoPubMedAQP7P3
iHOPAQP7P3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:38 CEST 2017

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