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AQP8 (aquaporin 8)

Identity

Other aliasAQP-8
HGNC (Hugo) AQP8
LocusID (NCBI) 343
Atlas_Id 46536
Location 16p12.1  [Link to chromosome band 16p12]
Location_base_pair Starts at 25228285 and ends at 25240253 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AQP8   642
Cards
Entrez_Gene (NCBI)AQP8  343  aquaporin 8
AliasesAQP-8
GeneCards (Weizmann)AQP8
Ensembl hg19 (Hinxton)ENSG00000103375 [Gene_View]  chr16:25228285-25240253 [Contig_View]  AQP8 [Vega]
Ensembl hg38 (Hinxton)ENSG00000103375 [Gene_View]  chr16:25228285-25240253 [Contig_View]  AQP8 [Vega]
ICGC DataPortalENSG00000103375
TCGA cBioPortalAQP8
AceView (NCBI)AQP8
Genatlas (Paris)AQP8
WikiGenes343
SOURCE (Princeton)AQP8
Genetics Home Reference (NIH)AQP8
Genomic and cartography
GoldenPath hg19 (UCSC)AQP8  -     chr16:25228285-25240253 +  16p12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)AQP8  -     16p12.1   [Description]    (hg38-Dec_2013)
EnsemblAQP8 - 16p12.1 [CytoView hg19]  AQP8 - 16p12.1 [CytoView hg38]
Mapping of homologs : NCBIAQP8 [Mapview hg19]  AQP8 [Mapview hg38]
OMIM603750   
Gene and transcription
Genbank (Entrez)AB013456 AF067797 AK222964 AK222975 BC040630
RefSeq transcript (Entrez)NM_001169
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187260 NW_004929400
Consensus coding sequences : CCDS (NCBI)AQP8
Cluster EST : UnigeneHs.176658 [ NCBI ]
CGAP (NCI)Hs.176658
Alternative Splicing GalleryENSG00000103375
Gene ExpressionAQP8 [ NCBI-GEO ]   AQP8 [ EBI - ARRAY_EXPRESS ]   AQP8 [ SEEK ]   AQP8 [ MEM ]
Gene Expression Viewer (FireBrowse)AQP8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)343
GTEX Portal (Tissue expression)AQP8
Protein : pattern, domain, 3D structure
UniProt/SwissProtO94778   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO94778  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO94778
Splice isoforms : SwissVarO94778
PhosPhoSitePlusO94778
Domaine pattern : Prosite (Expaxy)MIP (PS00221)   
Domains : Interpro (EBI)Aquaporin-like    Aquaporin_8    MIP    MIP_CS   
Domain families : Pfam (Sanger)MIP (PF00230)   
Domain families : Pfam (NCBI)pfam00230   
Conserved Domain (NCBI)AQP8
DMDM Disease mutations343
Blocks (Seattle)AQP8
SuperfamilyO94778
Human Protein AtlasENSG00000103375
Peptide AtlasO94778
HPRD04778
IPIIPI00395685   
Protein Interaction databases
DIP (DOE-UCLA)O94778
IntAct (EBI)O94778
FunCoupENSG00000103375
BioGRIDAQP8
STRING (EMBL)AQP8
ZODIACAQP8
Ontologies - Pathways
QuickGOO94778
Ontology : AmiGOplasma membrane  integral component of plasma membrane  transport  water transport  cellular water homeostasis  water channel activity  glycerol channel activity  glycerol transport  ion transmembrane transport  apical part of cell  cellular response to cAMP  
Ontology : EGO-EBIplasma membrane  integral component of plasma membrane  transport  water transport  cellular water homeostasis  water channel activity  glycerol channel activity  glycerol transport  ion transmembrane transport  apical part of cell  cellular response to cAMP  
Pathways : KEGGBile secretion   
NDEx NetworkAQP8
Atlas of Cancer Signalling NetworkAQP8
Wikipedia pathwaysAQP8
Orthology - Evolution
OrthoDB343
GeneTree (enSembl)ENSG00000103375
Phylogenetic Trees/Animal Genes : TreeFamAQP8
HOVERGENO94778
HOGENOMO94778
Homologs : HomoloGeneAQP8
Homology/Alignments : Family Browser (UCSC)AQP8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAQP8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AQP8
dbVarAQP8
ClinVarAQP8
1000_GenomesAQP8 
Exome Variant ServerAQP8
ExAC (Exome Aggregation Consortium)AQP8 (select the gene name)
Genetic variants : HAPMAP343
Genomic Variants (DGV)AQP8 [DGVbeta]
DECIPHER (Syndromes)16:25228285-25240253  ENSG00000103375
CONAN: Copy Number AnalysisAQP8 
Mutations
ICGC Data PortalAQP8 
TCGA Data PortalAQP8 
Broad Tumor PortalAQP8
OASIS PortalAQP8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAQP8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAQP8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AQP8
DgiDB (Drug Gene Interaction Database)AQP8
DoCM (Curated mutations)AQP8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AQP8 (select a term)
intoGenAQP8
Cancer3DAQP8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603750   
Orphanet
MedgenAQP8
Genetic Testing Registry AQP8
NextProtO94778 [Medical]
TSGene343
GENETestsAQP8
Huge Navigator AQP8 [HugePedia]
snp3D : Map Gene to Disease343
BioCentury BCIQAQP8
ClinGenAQP8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD343
Chemical/Pharm GKB GenePA24926
Clinical trialAQP8
Miscellaneous
canSAR (ICR)AQP8 (select the gene name)
Probes
Litterature
PubMed54 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAQP8
EVEXAQP8
GoPubMedAQP8
iHOPAQP8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:56:14 CET 2017

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