Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

AQP8 (aquaporin 8)

Identity

Alias (NCBI)AQP-8
HGNC (Hugo) AQP8
LocusID (NCBI) 343
Atlas_Id 46536
Location 16p12.1  [Link to chromosome band 16p12]
Location_base_pair Starts at 25216947 and ends at 25228932 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)AQP8   642
Cards
Entrez_Gene (NCBI)AQP8    aquaporin 8
AliasesAQP-8
GeneCards (Weizmann)AQP8
Ensembl hg19 (Hinxton)ENSG00000103375 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103375 [Gene_View]  ENSG00000103375 [Sequence]  chr16:25216947-25228932 [Contig_View]  AQP8 [Vega]
ICGC DataPortalENSG00000103375
TCGA cBioPortalAQP8
AceView (NCBI)AQP8
Genatlas (Paris)AQP8
SOURCE (Princeton)AQP8
Genetics Home Reference (NIH)AQP8
Genomic and cartography
GoldenPath hg38 (UCSC)AQP8  -     chr16:25216947-25228932 +  16p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AQP8  -     16p12.1   [Description]    (hg19-Feb_2009)
GoldenPathAQP8 - 16p12.1 [CytoView hg19]  AQP8 - 16p12.1 [CytoView hg38]
ImmunoBaseENSG00000103375
Genome Data Viewer NCBIAQP8 [Mapview hg19]  
OMIM603750   
Gene and transcription
Genbank (Entrez)AB013456 AF067797 AK222964 AK222975 BC040630
RefSeq transcript (Entrez)NM_001169
Consensus coding sequences : CCDS (NCBI)AQP8
Gene ExpressionAQP8 [ NCBI-GEO ]   AQP8 [ EBI - ARRAY_EXPRESS ]   AQP8 [ SEEK ]   AQP8 [ MEM ]
Gene Expression Viewer (FireBrowse)AQP8 [ Firebrowse - Broad ]
GenevisibleExpression of AQP8 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)343
GTEX Portal (Tissue expression)AQP8
Human Protein AtlasENSG00000103375-AQP8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO94778   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO94778  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO94778
PhosPhoSitePlusO94778
Domaine pattern : Prosite (Expaxy)MIP (PS00221)   
Domains : Interpro (EBI)Aquaporin-like    Aquaporin_8    Aquaporin_transptr    MIP    MIP_CS   
Domain families : Pfam (Sanger)MIP (PF00230)   
Domain families : Pfam (NCBI)pfam00230   
Conserved Domain (NCBI)AQP8
SuperfamilyO94778
AlphaFold pdb e-kbO94778   
Human Protein Atlas [tissue]ENSG00000103375-AQP8 [tissue]
HPRD04778
Protein Interaction databases
DIP (DOE-UCLA)O94778
IntAct (EBI)O94778
BioGRIDAQP8
STRING (EMBL)AQP8
ZODIACAQP8
Ontologies - Pathways
QuickGOO94778
Ontology : AmiGOprotein binding  plasma membrane  integral component of plasma membrane  water transport  water channel activity  mitochondrial membrane  apical part of cell  transmembrane transport  cellular response to cAMP  
Ontology : EGO-EBIprotein binding  plasma membrane  integral component of plasma membrane  water transport  water channel activity  mitochondrial membrane  apical part of cell  transmembrane transport  cellular response to cAMP  
NDEx NetworkAQP8
Atlas of Cancer Signalling NetworkAQP8
Wikipedia pathwaysAQP8
Orthology - Evolution
OrthoDB343
GeneTree (enSembl)ENSG00000103375
Phylogenetic Trees/Animal Genes : TreeFamAQP8
Homologs : HomoloGeneAQP8
Homology/Alignments : Family Browser (UCSC)AQP8
Gene fusions - Rearrangements
Fusion : QuiverAQP8
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAQP8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AQP8
dbVarAQP8
ClinVarAQP8
MonarchAQP8
1000_GenomesAQP8 
Exome Variant ServerAQP8
GNOMAD BrowserENSG00000103375
Varsome BrowserAQP8
ACMGAQP8 variants
VarityO94778
Genomic Variants (DGV)AQP8 [DGVbeta]
DECIPHERAQP8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAQP8 
Mutations
ICGC Data PortalAQP8 
TCGA Data PortalAQP8 
Broad Tumor PortalAQP8
OASIS PortalAQP8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAQP8  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DAQP8
Mutations and Diseases : HGMDAQP8
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaAQP8
DgiDB (Drug Gene Interaction Database)AQP8
DoCM (Curated mutations)AQP8
CIViC (Clinical Interpretations of Variants in Cancer)AQP8
Cancer3DAQP8
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603750   
Orphanet
DisGeNETAQP8
MedgenAQP8
Genetic Testing Registry AQP8
NextProtO94778 [Medical]
GENETestsAQP8
Target ValidationAQP8
Huge Navigator AQP8 [HugePedia]
ClinGenAQP8
Clinical trials, drugs, therapy
MyCancerGenomeAQP8
Protein Interactions : CTDAQP8
Pharm GKB GenePA24926
PharosO94778
Clinical trialAQP8
Miscellaneous
canSAR (ICR)AQP8
HarmonizomeAQP8
ARCHS4AQP8
DataMed IndexAQP8
Probes
Litterature
PubMed76 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXAQP8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jan 20 12:22:55 CET 2022

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.