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ARAP1 (ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1)

Identity

Alias (NCBI)CENTD2
HGNC (Hugo) ARAP1
HGNC Previous nameCENTD2
HGNC Previous namecentaurin, delta 2
LocusID (NCBI) 116985
Atlas_Id 50392
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 72685069 and ends at 72722358 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ARAP1 (11q13.4)::FADD (11q13.3)ARAP1 (11q13.4)::MOGAT2 (11q13.5)ARAP1 (11q13.4)::RP11-831H9.11 ()
ARAP1 (11q13.4)::SDCCAG3 (9q34.3)ARAP1 (11q13.4)::USP35 (11q14.1)ATP1B1 (1q24.2)::ARAP1 (11q13.4)
MKL1 (22q13.1)::ARAP1 (11q13.4)SLC39A11 (17q24.3)::ARAP1 (11q13.4)ARAP1 11q13.4::FADD 11q13.3
ARAP1 11q13.4::MOGAT2 11q13.5ARAP1 11q13.4 RP11-831H9.11ARAP1 11q13.4::USP35 11q14.1
MKL1 22q13.1::ARAP1 11q13.4

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ARAP1   16925
Cards
Entrez_Gene (NCBI)ARAP1    ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
AliasesCENTD2
GeneCards (Weizmann)ARAP1
Ensembl hg19 (Hinxton)ENSG00000186635 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186635 [Gene_View]  ENSG00000186635 [Sequence]  chr11:72685069-72722358 [Contig_View]  ARAP1 [Vega]
ICGC DataPortalENSG00000186635
TCGA cBioPortalARAP1
AceView (NCBI)ARAP1
Genatlas (Paris)ARAP1
SOURCE (Princeton)ARAP1
Genetics Home Reference (NIH)ARAP1
Genomic and cartography
GoldenPath hg38 (UCSC)ARAP1  -     chr11:72685069-72722358 -  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARAP1  -     11q13.4   [Description]    (hg19-Feb_2009)
GoldenPathARAP1 - 11q13.4 [CytoView hg19]  ARAP1 - 11q13.4 [CytoView hg38]
ImmunoBaseENSG00000186635
Genome Data Viewer NCBIARAP1 [Mapview hg19]  
OMIM606646   
Gene and transcription
Genbank (Entrez)AB018325 AF411983 AJ621557 AJ706973 AK160383
RefSeq transcript (Entrez)NM_001040118 NM_001135190 NM_001369489 NM_015242
Consensus coding sequences : CCDS (NCBI)ARAP1
Gene ExpressionARAP1 [ NCBI-GEO ]   ARAP1 [ EBI - ARRAY_EXPRESS ]   ARAP1 [ SEEK ]   ARAP1 [ MEM ]
Gene Expression Viewer (FireBrowse)ARAP1 [ Firebrowse - Broad ]
GenevisibleExpression of ARAP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)116985
GTEX Portal (Tissue expression)ARAP1
Human Protein AtlasENSG00000186635-ARAP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARAP1
Human Protein Atlas [tissue]ENSG00000186635-ARAP1 [tissue]
HPRD09440
Protein Interaction databases
BioGRIDARAP1
STRING (EMBL)ARAP1
ZODIACARAP1
Ontologies - Pathways
Litterature
PubMed54 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXARAP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 12:22:57 CET 2022

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