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ARFGAP1 (ADP ribosylation factor GTPase activating protein 1)

Identity

Alias (NCBI)ARF1GAP
HRIHFB2281
HGNC (Hugo) ARFGAP1
HGNC Alias symbFLJ10767
bA261N11.3
HGNC Previous nameARF1GAP
HGNC Previous nameADP-ribosylation factor 1 GTPase activating protein
LocusID (NCBI) 55738
Atlas_Id 60455
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 63272813 and ends at 63289790 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ARFGAP1 (20q13.33) / ARFGAP1 (20q13.33)ARFGAP1 (20q13.33) / SPAG4 (20q11.22)GUK1 (1q42.13) / ARFGAP1 (20q13.33)
SEC31A (4q21.22) / ARFGAP1 (20q13.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ARFGAP1   15852
Cards
Entrez_Gene (NCBI)ARFGAP1    ADP ribosylation factor GTPase activating protein 1
AliasesARF1GAP; HRIHFB2281
GeneCards (Weizmann)ARFGAP1
Ensembl hg19 (Hinxton)ENSG00000101199 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000101199 [Gene_View]  ENSG00000101199 [Sequence]  chr20:63272813-63289790 [Contig_View]  ARFGAP1 [Vega]
ICGC DataPortalENSG00000101199
TCGA cBioPortalARFGAP1
AceView (NCBI)ARFGAP1
Genatlas (Paris)ARFGAP1
SOURCE (Princeton)ARFGAP1
Genetics Home Reference (NIH)ARFGAP1
Genomic and cartography
GoldenPath hg38 (UCSC)ARFGAP1  -     chr20:63272813-63289790 +  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARFGAP1  -     20q13.33   [Description]    (hg19-Feb_2009)
GoldenPathARFGAP1 - 20q13.33 [CytoView hg19]  ARFGAP1 - 20q13.33 [CytoView hg38]
ImmunoBaseENSG00000101199
Genome Data Viewer NCBIARFGAP1 [Mapview hg19]  
OMIM608377   
Gene and transcription
Genbank (Entrez)AA565406 AB015340 AK001629 AK027268 AK027441
RefSeq transcript (Entrez)NM_001281482 NM_001281483 NM_001281484 NM_018209 NM_175609
Consensus coding sequences : CCDS (NCBI)ARFGAP1
Gene ExpressionARFGAP1 [ NCBI-GEO ]   ARFGAP1 [ EBI - ARRAY_EXPRESS ]   ARFGAP1 [ SEEK ]   ARFGAP1 [ MEM ]
Gene Expression Viewer (FireBrowse)ARFGAP1 [ Firebrowse - Broad ]
GenevisibleExpression of ARFGAP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55738
GTEX Portal (Tissue expression)ARFGAP1
Human Protein AtlasENSG00000101199-ARFGAP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARFGAP1
Human Protein Atlas [tissue]ENSG00000101199-ARFGAP1 [tissue]
HPRD06443
Protein Interaction databases
BioGRIDARFGAP1
STRING (EMBL)ARFGAP1
ZODIACARFGAP1
Ontologies - Pathways
Litterature
PubMed65 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXARFGAP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:42:25 CEST 2021

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