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ARGLU1 (arginine and glutamate rich 1)

Identity

Alias (NCBI)-
HGNC (Hugo) ARGLU1
HGNC Alias symbFLJ10154
LocusID (NCBI) 55082
Atlas_Id 52338
Location 13q33.3  [Link to chromosome band 13q33]
Location_base_pair Starts at 106541673 and ends at 106568137 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ARGLU1 (13q33.3) / CXCR4 (2q22.1)ARGLU1 (13q33.3) / LPIN1 (2p25.1)ARGLU1 (13q33.3) / NACA (12q13.3)
ARGLU1 (13q33.3) / NAPG (18p11.22)ENOPH1 (4q21.22) / ARGLU1 (13q33.3)PDE5A (4q26) / ARGLU1 (13q33.3)
RPS4Y1 (Yp11.31) / ARGLU1 (13q33.3)SH3GL1 (19p13.3) / ARGLU1 (13q33.3)ARGLU1 13q33.3 / CXCR4 2q22.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ARGLU1   25482
Cards
Entrez_Gene (NCBI)ARGLU1    arginine and glutamate rich 1
Aliases
GeneCards (Weizmann)ARGLU1
Ensembl hg19 (Hinxton)ENSG00000134884 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134884 [Gene_View]  ENSG00000134884 [Sequence]  chr13:106541673-106568137 [Contig_View]  ARGLU1 [Vega]
ICGC DataPortalENSG00000134884
TCGA cBioPortalARGLU1
AceView (NCBI)ARGLU1
Genatlas (Paris)ARGLU1
SOURCE (Princeton)ARGLU1
Genetics Home Reference (NIH)ARGLU1
Genomic and cartography
GoldenPath hg38 (UCSC)ARGLU1  -     chr13:106541673-106568137 -  13q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARGLU1  -     13q33.3   [Description]    (hg19-Feb_2009)
GoldenPathARGLU1 - 13q33.3 [CytoView hg19]  ARGLU1 - 13q33.3 [CytoView hg38]
ImmunoBaseENSG00000134884
Genome Data Viewer NCBIARGLU1 [Mapview hg19]  
OMIM614046   
Gene and transcription
Genbank (Entrez)AA445997 AI623424 AK001016 AK303575 AK304751
RefSeq transcript (Entrez)NM_018011
Consensus coding sequences : CCDS (NCBI)ARGLU1
Gene ExpressionARGLU1 [ NCBI-GEO ]   ARGLU1 [ EBI - ARRAY_EXPRESS ]   ARGLU1 [ SEEK ]   ARGLU1 [ MEM ]
Gene Expression Viewer (FireBrowse)ARGLU1 [ Firebrowse - Broad ]
GenevisibleExpression of ARGLU1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55082
GTEX Portal (Tissue expression)ARGLU1
Human Protein AtlasENSG00000134884-ARGLU1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NWB6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NWB6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NWB6
PhosPhoSitePlusQ9NWB6
Domains : Interpro (EBI)ARGLU1   
Domain families : Pfam (Sanger)ARGLU (PF15346)   
Domain families : Pfam (NCBI)pfam15346   
Conserved Domain (NCBI)ARGLU1
SuperfamilyQ9NWB6
AlphaFold pdb e-kbQ9NWB6   
Human Protein Atlas [tissue]ENSG00000134884-ARGLU1 [tissue]
HPRD07648
Protein Interaction databases
DIP (DOE-UCLA)Q9NWB6
IntAct (EBI)Q9NWB6
BioGRIDARGLU1
STRING (EMBL)ARGLU1
ZODIACARGLU1
Ontologies - Pathways
QuickGOQ9NWB6
Ontology : AmiGOprotein binding  nucleoplasm  nucleoplasm  mitochondrion  mitochondrion  cytosol  cadherin binding  
Ontology : EGO-EBIprotein binding  nucleoplasm  nucleoplasm  mitochondrion  mitochondrion  cytosol  cadherin binding  
NDEx NetworkARGLU1
Atlas of Cancer Signalling NetworkARGLU1
Wikipedia pathwaysARGLU1
Orthology - Evolution
OrthoDB55082
GeneTree (enSembl)ENSG00000134884
Phylogenetic Trees/Animal Genes : TreeFamARGLU1
Homologs : HomoloGeneARGLU1
Homology/Alignments : Family Browser (UCSC)ARGLU1
Gene fusions - Rearrangements
Fusion : MitelmanARGLU1/CXCR4 [13q33.3/2q22.1]  
Fusion : QuiverARGLU1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARGLU1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARGLU1
dbVarARGLU1
ClinVarARGLU1
MonarchARGLU1
1000_GenomesARGLU1 
Exome Variant ServerARGLU1
GNOMAD BrowserENSG00000134884
Varsome BrowserARGLU1
ACMGARGLU1 variants
VarityQ9NWB6
Genomic Variants (DGV)ARGLU1 [DGVbeta]
DECIPHERARGLU1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARGLU1 
Mutations
ICGC Data PortalARGLU1 
TCGA Data PortalARGLU1 
Broad Tumor PortalARGLU1
OASIS PortalARGLU1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARGLU1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DARGLU1
Mutations and Diseases : HGMDARGLU1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaARGLU1
DgiDB (Drug Gene Interaction Database)ARGLU1
DoCM (Curated mutations)ARGLU1
CIViC (Clinical Interpretations of Variants in Cancer)ARGLU1
Cancer3DARGLU1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614046   
Orphanet
DisGeNETARGLU1
MedgenARGLU1
Genetic Testing Registry ARGLU1
NextProtQ9NWB6 [Medical]
GENETestsARGLU1
Target ValidationARGLU1
Huge Navigator ARGLU1 [HugePedia]
ClinGenARGLU1
Clinical trials, drugs, therapy
MyCancerGenomeARGLU1
Protein Interactions : CTDARGLU1
Pharm GKB GenePA162376869
PharosQ9NWB6
Clinical trialARGLU1
Miscellaneous
canSAR (ICR)ARGLU1
HarmonizomeARGLU1
DataMed IndexARGLU1
Probes
Litterature
PubMed48 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXARGLU1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 14:59:54 CEST 2021

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