Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ARHGAP17 (Rho GTPase activating protein 17)

Identity

Alias (NCBI)MST066
MST110
MSTP038
MSTP066
MSTP110
NADRIN
PP367
PP4534
RICH-1
RICH1
WBP15
HGNC (Hugo) ARHGAP17
HGNC Alias symbRICH1
FLJ10308
NADRIN
FLJ13219
WBP15
LocusID (NCBI) 55114
Atlas_Id 43134
Location 16p12.1  [Link to chromosome band 16p12]
Location_base_pair Starts at 24919391 and ends at 25015369 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AFF1 (4q21.3) / ARHGAP17 (16p12.1)ARHGAP17 (16p12.1) / NFIC (19p13.3)CAPRIN1 (11p13) / ARHGAP17 (16p12.1)
FBN1 (15q21.1) / ARHGAP17 (16p12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ARHGAP17   18239
Cards
Entrez_Gene (NCBI)ARHGAP17    Rho GTPase activating protein 17
AliasesMST066; MST110; MSTP038; MSTP066; 
MSTP110; NADRIN; PP367; PP4534; RICH-1; RICH1; WBP15
GeneCards (Weizmann)ARHGAP17
Ensembl hg19 (Hinxton)ENSG00000140750 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000140750 [Gene_View]  ENSG00000140750 [Sequence]  chr16:24919391-25015369 [Contig_View]  ARHGAP17 [Vega]
ICGC DataPortalENSG00000140750
TCGA cBioPortalARHGAP17
AceView (NCBI)ARHGAP17
Genatlas (Paris)ARHGAP17
SOURCE (Princeton)ARHGAP17
Genetics Home Reference (NIH)ARHGAP17
Genomic and cartography
GoldenPath hg38 (UCSC)ARHGAP17  -     chr16:24919391-25015369 -  16p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARHGAP17  -     16p12.1   [Description]    (hg19-Feb_2009)
GoldenPathARHGAP17 - 16p12.1 [CytoView hg19]  ARHGAP17 - 16p12.1 [CytoView hg38]
ImmunoBaseENSG00000140750
Genome Data Viewer NCBIARHGAP17 [Mapview hg19]  
OMIM608293   
Gene and transcription
Genbank (Entrez)AF113218 AF163257 AF173885 AF258560 AF258580
RefSeq transcript (Entrez)NM_001006634 NM_018054
Consensus coding sequences : CCDS (NCBI)ARHGAP17
Gene ExpressionARHGAP17 [ NCBI-GEO ]   ARHGAP17 [ EBI - ARRAY_EXPRESS ]   ARHGAP17 [ SEEK ]   ARHGAP17 [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGAP17 [ Firebrowse - Broad ]
GenevisibleExpression of ARHGAP17 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55114
GTEX Portal (Tissue expression)ARHGAP17
Human Protein AtlasENSG00000140750-ARHGAP17 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARHGAP17
Human Protein Atlas [tissue]ENSG00000140750-ARHGAP17 [tissue]
HPRD12207
Protein Interaction databases
BioGRIDARHGAP17
STRING (EMBL)ARHGAP17
ZODIACARHGAP17
Ontologies - Pathways
Litterature
PubMed40 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXARHGAP17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 14:59:56 CEST 2021

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