Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ARHGAP19-SLIT1 (ARHGAP19-SLIT1 readthrough (NMD candidate))

Identity

Other alias-
HGNC (Hugo) ARHGAP19-SLIT1
LocusID (NCBI) 100533184
Atlas_Id 60460
Location 10q24.1  [Link to chromosome band 10q24]
Location_base_pair Starts at 97153042 and ends at 97292673 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARHGAP19-SLIT1   48348
Cards
Entrez_Gene (NCBI)ARHGAP19-SLIT1  100533184  ARHGAP19-SLIT1 readthrough (NMD candidate)
Aliases
GeneCards (Weizmann)ARHGAP19-SLIT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:97153042-97292673 [Contig_View]  ARHGAP19-SLIT1 [Vega]
TCGA cBioPortalARHGAP19-SLIT1
AceView (NCBI)ARHGAP19-SLIT1
Genatlas (Paris)ARHGAP19-SLIT1
WikiGenes100533184
SOURCE (Princeton)ARHGAP19-SLIT1
Genetics Home Reference (NIH)ARHGAP19-SLIT1
Genomic and cartography
GoldenPath hg38 (UCSC)ARHGAP19-SLIT1  -     chr10:97153042-97292673 -  10q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARHGAP19-SLIT1  -     10q24.1   [Description]    (hg19-Feb_2009)
EnsemblARHGAP19-SLIT1 - 10q24.1 [CytoView hg19]  ARHGAP19-SLIT1 - 10q24.1 [CytoView hg38]
Mapping of homologs : NCBIARHGAP19-SLIT1 [Mapview hg19]  ARHGAP19-SLIT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA431797 AY336750
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARHGAP19-SLIT1
Cluster EST : UnigeneHs.80305 [ NCBI ]
CGAP (NCI)Hs.80305
Gene ExpressionARHGAP19-SLIT1 [ NCBI-GEO ]   ARHGAP19-SLIT1 [ EBI - ARRAY_EXPRESS ]   ARHGAP19-SLIT1 [ SEEK ]   ARHGAP19-SLIT1 [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGAP19-SLIT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100533184
GTEX Portal (Tissue expression)ARHGAP19-SLIT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARHGAP19-SLIT1
DMDM Disease mutations100533184
Blocks (Seattle)ARHGAP19-SLIT1
Protein Interaction databases
BioGRIDARHGAP19-SLIT1
STRING (EMBL)ARHGAP19-SLIT1
ZODIACARHGAP19-SLIT1
Ontologies - Pathways
Huge Navigator ARHGAP19-SLIT1 [HugePedia]
snp3D : Map Gene to Disease100533184
BioCentury BCIQARHGAP19-SLIT1
ClinGenARHGAP19-SLIT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100533184
Clinical trialARHGAP19-SLIT1
Miscellaneous
canSAR (ICR)ARHGAP19-SLIT1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARHGAP19-SLIT1
EVEXARHGAP19-SLIT1
GoPubMedARHGAP19-SLIT1
iHOPARHGAP19-SLIT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:00:39 CEST 2017

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