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ARHGAP31 (Rho GTPase activating protein 31)

Identity

Alias_symbol (synonym)CDGAP
Other aliasAOS1
HGNC (Hugo) ARHGAP31
LocusID (NCBI) 57514
Atlas_Id 60466
Location 3q13.32  [Link to chromosome band 3q13]
Location_base_pair Starts at 119294373 and ends at 119419476 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ARHGAP31 (3q13.33) / CD320 (19p13.2)FDFT1 (8p23.1) / ARHGAP31 (3q13.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARHGAP31   29216
Cards
Entrez_Gene (NCBI)ARHGAP31  57514  Rho GTPase activating protein 31
AliasesAOS1; CDGAP
GeneCards (Weizmann)ARHGAP31
Ensembl hg19 (Hinxton)ENSG00000031081 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000031081 [Gene_View]  chr3:119294373-119419476 [Contig_View]  ARHGAP31 [Vega]
ICGC DataPortalENSG00000031081
TCGA cBioPortalARHGAP31
AceView (NCBI)ARHGAP31
Genatlas (Paris)ARHGAP31
WikiGenes57514
SOURCE (Princeton)ARHGAP31
Genetics Home Reference (NIH)ARHGAP31
Genomic and cartography
GoldenPath hg38 (UCSC)ARHGAP31  -     chr3:119294373-119419476 +  3q13.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARHGAP31  -     3q13.32   [Description]    (hg19-Feb_2009)
EnsemblARHGAP31 - 3q13.32 [CytoView hg19]  ARHGAP31 - 3q13.32 [CytoView hg38]
Mapping of homologs : NCBIARHGAP31 [Mapview hg19]  ARHGAP31 [Mapview hg38]
OMIM100300   610911   
Gene and transcription
Genbank (Entrez)AB033030 AK026689 AK293726 BC112163 BC112165
RefSeq transcript (Entrez)NM_020754
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARHGAP31
Cluster EST : UnigeneHs.668218 [ NCBI ]
CGAP (NCI)Hs.668218
Alternative Splicing GalleryENSG00000031081
Gene ExpressionARHGAP31 [ NCBI-GEO ]   ARHGAP31 [ EBI - ARRAY_EXPRESS ]   ARHGAP31 [ SEEK ]   ARHGAP31 [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGAP31 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57514
GTEX Portal (Tissue expression)ARHGAP31
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2M1Z3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2M1Z3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2M1Z3
Splice isoforms : SwissVarQ2M1Z3
PhosPhoSitePlusQ2M1Z3
Domaine pattern : Prosite (Expaxy)RHOGAP (PS50238)   
Domains : Interpro (EBI)Rho_GTPase_activation_prot    RhoGAP_dom   
Domain families : Pfam (Sanger)RhoGAP (PF00620)   
Domain families : Pfam (NCBI)pfam00620   
Domain families : Smart (EMBL)RhoGAP (SM00324)  
Conserved Domain (NCBI)ARHGAP31
DMDM Disease mutations57514
Blocks (Seattle)ARHGAP31
SuperfamilyQ2M1Z3
Human Protein AtlasENSG00000031081
Peptide AtlasQ2M1Z3
HPRD16697
IPIIPI00297288   IPI00922141   
Protein Interaction databases
DIP (DOE-UCLA)Q2M1Z3
IntAct (EBI)Q2M1Z3
FunCoupENSG00000031081
BioGRIDARHGAP31
STRING (EMBL)ARHGAP31
ZODIACARHGAP31
Ontologies - Pathways
QuickGOQ2M1Z3
Ontology : AmiGOGTPase activator activity  GTPase activator activity  cytosol  focal adhesion  small GTPase mediated signal transduction  SH3 domain binding  lamellipodium  positive regulation of GTPase activity  regulation of small GTPase mediated signal transduction  
Ontology : EGO-EBIGTPase activator activity  GTPase activator activity  cytosol  focal adhesion  small GTPase mediated signal transduction  SH3 domain binding  lamellipodium  positive regulation of GTPase activity  regulation of small GTPase mediated signal transduction  
NDEx NetworkARHGAP31
Atlas of Cancer Signalling NetworkARHGAP31
Wikipedia pathwaysARHGAP31
Orthology - Evolution
OrthoDB57514
GeneTree (enSembl)ENSG00000031081
Phylogenetic Trees/Animal Genes : TreeFamARHGAP31
HOVERGENQ2M1Z3
HOGENOMQ2M1Z3
Homologs : HomoloGeneARHGAP31
Homology/Alignments : Family Browser (UCSC)ARHGAP31
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARHGAP31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARHGAP31
dbVarARHGAP31
ClinVarARHGAP31
1000_GenomesARHGAP31 
Exome Variant ServerARHGAP31
ExAC (Exome Aggregation Consortium)ARHGAP31 (select the gene name)
Genetic variants : HAPMAP57514
Genomic Variants (DGV)ARHGAP31 [DGVbeta]
DECIPHERARHGAP31 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARHGAP31 
Mutations
ICGC Data PortalARHGAP31 
TCGA Data PortalARHGAP31 
Broad Tumor PortalARHGAP31
OASIS PortalARHGAP31 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARHGAP31  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARHGAP31
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARHGAP31
DgiDB (Drug Gene Interaction Database)ARHGAP31
DoCM (Curated mutations)ARHGAP31 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARHGAP31 (select a term)
intoGenARHGAP31
Cancer3DARHGAP31(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM100300    610911   
Orphanet1294   
MedgenARHGAP31
Genetic Testing Registry ARHGAP31
NextProtQ2M1Z3 [Medical]
TSGene57514
GENETestsARHGAP31
Target ValidationARHGAP31
Huge Navigator ARHGAP31 [HugePedia]
snp3D : Map Gene to Disease57514
BioCentury BCIQARHGAP31
ClinGenARHGAP31
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57514
Chemical/Pharm GKB GenePA165696843
Clinical trialARHGAP31
Miscellaneous
canSAR (ICR)ARHGAP31 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARHGAP31
EVEXARHGAP31
GoPubMedARHGAP31
iHOPARHGAP31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:40 CEST 2017

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