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ARHGAP5-AS1 (ARHGAP5 antisense RNA 1 (head to head))

Identity

Alias_namesC14orf128
chromosome 14 open reading frame 128
ARHGAP5 antisense RNA 1 (non-protein coding)
ARHGAP5 antisense RNA 1
Alias_symbol (synonym)MGC15504
Other alias
HGNC (Hugo) ARHGAP5-AS1
LocusID (NCBI) 84837
Atlas_Id 60474
Location 14q12  [Link to chromosome band 14q12]
Location_base_pair Starts at 32075603 and ends at 32076421 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARHGAP5-AS1   20279
Cards
Entrez_Gene (NCBI)ARHGAP5-AS1  84837  ARHGAP5 antisense RNA 1 (head to head)
AliasesC14orf128
GeneCards (Weizmann)ARHGAP5-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:32075603-32076421 [Contig_View]  ARHGAP5-AS1 [Vega]
TCGA cBioPortalARHGAP5-AS1
AceView (NCBI)ARHGAP5-AS1
Genatlas (Paris)ARHGAP5-AS1
WikiGenes84837
SOURCE (Princeton)ARHGAP5-AS1
Genetics Home Reference (NIH)ARHGAP5-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ARHGAP5-AS1  -     chr14:32075603-32076421 -  14q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARHGAP5-AS1  -     14q12   [Description]    (hg19-Feb_2009)
EnsemblARHGAP5-AS1 - 14q12 [CytoView hg19]  ARHGAP5-AS1 - 14q12 [CytoView hg38]
Mapping of homologs : NCBIARHGAP5-AS1 [Mapview hg19]  ARHGAP5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF147421 AI493138 AK314153 BC007251 BM745256
RefSeq transcript (Entrez)NM_032751
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARHGAP5-AS1
Cluster EST : UnigeneHs.496755 [ NCBI ]
CGAP (NCI)Hs.496755
Gene ExpressionARHGAP5-AS1 [ NCBI-GEO ]   ARHGAP5-AS1 [ EBI - ARRAY_EXPRESS ]   ARHGAP5-AS1 [ SEEK ]   ARHGAP5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGAP5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84837
GTEX Portal (Tissue expression)ARHGAP5-AS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IT6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IT6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IT6
Splice isoforms : SwissVarQ96IT6
PhosPhoSitePlusQ96IT6
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARHGAP5-AS1
DMDM Disease mutations84837
Blocks (Seattle)ARHGAP5-AS1
SuperfamilyQ96IT6
Peptide AtlasQ96IT6
IPIIPI00063805   IPI00848016   
Protein Interaction databases
DIP (DOE-UCLA)Q96IT6
IntAct (EBI)Q96IT6
BioGRIDARHGAP5-AS1
STRING (EMBL)ARHGAP5-AS1
ZODIACARHGAP5-AS1
Ontologies - Pathways
QuickGOQ96IT6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkARHGAP5-AS1
Atlas of Cancer Signalling NetworkARHGAP5-AS1
Wikipedia pathwaysARHGAP5-AS1
Orthology - Evolution
OrthoDB84837
Phylogenetic Trees/Animal Genes : TreeFamARHGAP5-AS1
HOVERGENQ96IT6
HOGENOMQ96IT6
Homologs : HomoloGeneARHGAP5-AS1
Homology/Alignments : Family Browser (UCSC)ARHGAP5-AS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARHGAP5-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARHGAP5-AS1
dbVarARHGAP5-AS1
ClinVarARHGAP5-AS1
1000_GenomesARHGAP5-AS1 
Exome Variant ServerARHGAP5-AS1
ExAC (Exome Aggregation Consortium)ARHGAP5-AS1 (select the gene name)
Genetic variants : HAPMAP84837
Genomic Variants (DGV)ARHGAP5-AS1 [DGVbeta]
DECIPHERARHGAP5-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARHGAP5-AS1 
Mutations
ICGC Data PortalARHGAP5-AS1 
TCGA Data PortalARHGAP5-AS1 
Broad Tumor PortalARHGAP5-AS1
OASIS PortalARHGAP5-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDARHGAP5-AS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARHGAP5-AS1
DgiDB (Drug Gene Interaction Database)ARHGAP5-AS1
DoCM (Curated mutations)ARHGAP5-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARHGAP5-AS1 (select a term)
intoGenARHGAP5-AS1
Cancer3DARHGAP5-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenARHGAP5-AS1
Genetic Testing Registry ARHGAP5-AS1
NextProtQ96IT6 [Medical]
TSGene84837
GENETestsARHGAP5-AS1
Target ValidationARHGAP5-AS1
Huge Navigator ARHGAP5-AS1 [HugePedia]
snp3D : Map Gene to Disease84837
BioCentury BCIQARHGAP5-AS1
ClinGenARHGAP5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84837
Chemical/Pharm GKB GenePA134905643
Clinical trialARHGAP5-AS1
Miscellaneous
canSAR (ICR)ARHGAP5-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARHGAP5-AS1
EVEXARHGAP5-AS1
GoPubMedARHGAP5-AS1
iHOPARHGAP5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:41 CEST 2017

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