Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ARHGEF26-AS1 (ARHGEF26 antisense RNA 1)

Identity

Alias_namesARHGEF26 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ARHGEF26-AS1
LocusID (NCBI) 100507524
Atlas_Id 60475
Location 3q25.2  [Link to chromosome band 3q25]
Location_base_pair Starts at 154024401 and ends at 154121210 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARHGEF26-AS1   41048
Cards
Entrez_Gene (NCBI)ARHGEF26-AS1  100507524  ARHGEF26 antisense RNA 1
Aliases
GeneCards (Weizmann)ARHGEF26-AS1
Ensembl hg19 (Hinxton)ENSG00000243069 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000243069 [Gene_View]  chr3:154024401-154121210 [Contig_View]  ARHGEF26-AS1 [Vega]
ICGC DataPortalENSG00000243069
TCGA cBioPortalARHGEF26-AS1
AceView (NCBI)ARHGEF26-AS1
Genatlas (Paris)ARHGEF26-AS1
WikiGenes100507524
SOURCE (Princeton)ARHGEF26-AS1
Genetics Home Reference (NIH)ARHGEF26-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ARHGEF26-AS1  -     chr3:154024401-154121210 -  3q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARHGEF26-AS1  -     3q25.2   [Description]    (hg19-Feb_2009)
EnsemblARHGEF26-AS1 - 3q25.2 [CytoView hg19]  ARHGEF26-AS1 - 3q25.2 [CytoView hg38]
Mapping of homologs : NCBIARHGEF26-AS1 [Mapview hg19]  ARHGEF26-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038431
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARHGEF26-AS1
Cluster EST : UnigeneHs.370221 [ NCBI ]
CGAP (NCI)Hs.370221
Alternative Splicing GalleryENSG00000243069
Gene ExpressionARHGEF26-AS1 [ NCBI-GEO ]   ARHGEF26-AS1 [ EBI - ARRAY_EXPRESS ]   ARHGEF26-AS1 [ SEEK ]   ARHGEF26-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGEF26-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507524
GTEX Portal (Tissue expression)ARHGEF26-AS1
Human Protein AtlasENSG00000243069-ARHGEF26-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARHGEF26-AS1
DMDM Disease mutations100507524
Blocks (Seattle)ARHGEF26-AS1
Human Protein Atlas [tissue]ENSG00000243069-ARHGEF26-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000243069
BioGRIDARHGEF26-AS1
STRING (EMBL)ARHGEF26-AS1
ZODIACARHGEF26-AS1
Ontologies - Pathways
Huge Navigator ARHGEF26-AS1 [HugePedia]
snp3D : Map Gene to Disease100507524
BioCentury BCIQARHGEF26-AS1
ClinGenARHGEF26-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507524
Clinical trialARHGEF26-AS1
Miscellaneous
canSAR (ICR)ARHGEF26-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARHGEF26-AS1
EVEXARHGEF26-AS1
GoPubMedARHGEF26-AS1
iHOPARHGEF26-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:06:58 CET 2017

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