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ARHGEF33 (Rho guanine nucleotide exchange factor (GEF) 33)

Identity

Alias_namesRho guanine nucleotide exchange factor (GEF) 33
Other alias-
HGNC (Hugo) ARHGEF33
LocusID (NCBI) 100271715
Atlas_Id 60476
Location 2p22.1  [Link to chromosome band 2p22]
Location_base_pair Starts at 39146504 and ends at 39202590 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARHGEF33   37252
Cards
Entrez_Gene (NCBI)ARHGEF33  100271715  Rho guanine nucleotide exchange factor (GEF) 33
Aliases
GeneCards (Weizmann)ARHGEF33
Ensembl hg19 (Hinxton)ENSG00000214694 [Gene_View]  chr2:39146504-39202590 [Contig_View]  ARHGEF33 [Vega]
Ensembl hg38 (Hinxton)ENSG00000214694 [Gene_View]  chr2:39146504-39202590 [Contig_View]  ARHGEF33 [Vega]
ICGC DataPortalENSG00000214694
TCGA cBioPortalARHGEF33
AceView (NCBI)ARHGEF33
Genatlas (Paris)ARHGEF33
WikiGenes100271715
SOURCE (Princeton)ARHGEF33
Genetics Home Reference (NIH)ARHGEF33
Genomic and cartography
GoldenPath hg19 (UCSC)ARHGEF33  -     chr2:39146504-39202590 +  2p22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ARHGEF33  -     2p22.1   [Description]    (hg38-Dec_2013)
EnsemblARHGEF33 - 2p22.1 [CytoView hg19]  ARHGEF33 - 2p22.1 [CytoView hg38]
Mapping of homologs : NCBIARHGEF33 [Mapview hg19]  ARHGEF33 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123375 AW468668 BX116314 DV080125 DV080126
RefSeq transcript (Entrez)NM_001145451
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)ARHGEF33
Cluster EST : UnigeneHs.99841 [ NCBI ]
CGAP (NCI)Hs.99841
Alternative Splicing GalleryENSG00000214694
Gene ExpressionARHGEF33 [ NCBI-GEO ]   ARHGEF33 [ EBI - ARRAY_EXPRESS ]   ARHGEF33 [ SEEK ]   ARHGEF33 [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGEF33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100271715
GTEX Portal (Tissue expression)ARHGEF33
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MVX0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8MVX0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8MVX0
Splice isoforms : SwissVarA8MVX0
PhosPhoSitePlusA8MVX0
Domaine pattern : Prosite (Expaxy)DH_2 (PS50010)   
Domains : Interpro (EBI)DH-domain   
Domain families : Pfam (Sanger)RhoGEF (PF00621)   
Domain families : Pfam (NCBI)pfam00621   
Conserved Domain (NCBI)ARHGEF33
DMDM Disease mutations100271715
Blocks (Seattle)ARHGEF33
SuperfamilyA8MVX0
Human Protein AtlasENSG00000214694
Peptide AtlasA8MVX0
IPIIPI00915871   IPI00872870   IPI00916033   
Protein Interaction databases
DIP (DOE-UCLA)A8MVX0
IntAct (EBI)A8MVX0
FunCoupENSG00000214694
BioGRIDARHGEF33
STRING (EMBL)ARHGEF33
ZODIACARHGEF33
Ontologies - Pathways
QuickGOA8MVX0
Ontology : AmiGORho guanyl-nucleotide exchange factor activity  positive regulation of GTPase activity  
Ontology : EGO-EBIRho guanyl-nucleotide exchange factor activity  positive regulation of GTPase activity  
NDEx NetworkARHGEF33
Atlas of Cancer Signalling NetworkARHGEF33
Wikipedia pathwaysARHGEF33
Orthology - Evolution
OrthoDB100271715
GeneTree (enSembl)ENSG00000214694
Phylogenetic Trees/Animal Genes : TreeFamARHGEF33
HOVERGENA8MVX0
HOGENOMA8MVX0
Homologs : HomoloGeneARHGEF33
Homology/Alignments : Family Browser (UCSC)ARHGEF33
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARHGEF33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARHGEF33
dbVarARHGEF33
ClinVarARHGEF33
1000_GenomesARHGEF33 
Exome Variant ServerARHGEF33
ExAC (Exome Aggregation Consortium)ARHGEF33 (select the gene name)
Genetic variants : HAPMAP100271715
Genomic Variants (DGV)ARHGEF33 [DGVbeta]
DECIPHER (Syndromes)2:39146504-39202590  ENSG00000214694
CONAN: Copy Number AnalysisARHGEF33 
Mutations
ICGC Data PortalARHGEF33 
TCGA Data PortalARHGEF33 
Broad Tumor PortalARHGEF33
OASIS PortalARHGEF33 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARHGEF33  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARHGEF33
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARHGEF33
DgiDB (Drug Gene Interaction Database)ARHGEF33
DoCM (Curated mutations)ARHGEF33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARHGEF33 (select a term)
intoGenARHGEF33
Cancer3DARHGEF33(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenARHGEF33
Genetic Testing Registry ARHGEF33
NextProtA8MVX0 [Medical]
TSGene100271715
GENETestsARHGEF33
Huge Navigator ARHGEF33 [HugePedia]
snp3D : Map Gene to Disease100271715
BioCentury BCIQARHGEF33
ClinGenARHGEF33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100271715
Chemical/Pharm GKB GenePA165696270
Clinical trialARHGEF33
Miscellaneous
canSAR (ICR)ARHGEF33 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARHGEF33
EVEXARHGEF33
GoPubMedARHGEF33
iHOPARHGEF33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:54:53 CET 2017

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