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ARHGEF35 (Rho guanine nucleotide exchange factor (GEF) 35)

Identity

Alias_namesARHGEF5L
Rho guanine nucleotide exchange factor (GEF) 5-like
Rho guanine nucleotide exchange factor (GEF) 35
Alias_symbol (synonym)FLJ43692
CTAGE4
Other alias
HGNC (Hugo) ARHGEF35
LocusID (NCBI) 445328
Atlas_Id 60478
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 143883176 and ends at 143892791 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARHGEF35   33846
Cards
Entrez_Gene (NCBI)ARHGEF35  445328  Rho guanine nucleotide exchange factor (GEF) 35
AliasesARHGEF5L
GeneCards (Weizmann)ARHGEF35
Ensembl hg19 (Hinxton)ENSG00000213214 [Gene_View]  chr7:143883176-143892791 [Contig_View]  ARHGEF35 [Vega]
Ensembl hg38 (Hinxton)ENSG00000213214 [Gene_View]  chr7:143883176-143892791 [Contig_View]  ARHGEF35 [Vega]
ICGC DataPortalENSG00000213214
TCGA cBioPortalARHGEF35
AceView (NCBI)ARHGEF35
Genatlas (Paris)ARHGEF35
WikiGenes445328
SOURCE (Princeton)ARHGEF35
Genetics Home Reference (NIH)ARHGEF35
Genomic and cartography
GoldenPath hg19 (UCSC)ARHGEF35  -     chr7:143883176-143892791 -  7q35   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ARHGEF35  -     7q35   [Description]    (hg38-Dec_2013)
EnsemblARHGEF35 - 7q35 [CytoView hg19]  ARHGEF35 - 7q35 [CytoView hg38]
Mapping of homologs : NCBIARHGEF35 [Mapview hg19]  ARHGEF35 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125680 BC136868 BC136878 DA646728 DQ786206
RefSeq transcript (Entrez)NM_001003702
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929333
Consensus coding sequences : CCDS (NCBI)ARHGEF35
Cluster EST : UnigeneHs.534621 [ NCBI ]
CGAP (NCI)Hs.534621
Alternative Splicing GalleryENSG00000213214
Gene ExpressionARHGEF35 [ NCBI-GEO ]   ARHGEF35 [ EBI - ARRAY_EXPRESS ]   ARHGEF35 [ SEEK ]   ARHGEF35 [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGEF35 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)445328
GTEX Portal (Tissue expression)ARHGEF35
Protein : pattern, domain, 3D structure
UniProt/SwissProtA5YM69   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA5YM69  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA5YM69
Splice isoforms : SwissVarA5YM69
PhosPhoSitePlusA5YM69
Domains : Interpro (EBI)ARHGEF5/35_N   
Domain families : Pfam (Sanger)ARHGEF5_35 (PF15441)   
Domain families : Pfam (NCBI)pfam15441   
Conserved Domain (NCBI)ARHGEF35
DMDM Disease mutations445328
Blocks (Seattle)ARHGEF35
SuperfamilyA5YM69
Human Protein AtlasENSG00000213214
Peptide AtlasA5YM69
HPRD13476
IPIIPI00419046   
Protein Interaction databases
DIP (DOE-UCLA)A5YM69
IntAct (EBI)A5YM69
FunCoupENSG00000213214
BioGRIDARHGEF35
STRING (EMBL)ARHGEF35
ZODIACARHGEF35
Ontologies - Pathways
QuickGOA5YM69
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkARHGEF35
Atlas of Cancer Signalling NetworkARHGEF35
Wikipedia pathwaysARHGEF35
Orthology - Evolution
OrthoDB445328
GeneTree (enSembl)ENSG00000213214
Phylogenetic Trees/Animal Genes : TreeFamARHGEF35
HOVERGENA5YM69
HOGENOMA5YM69
Homologs : HomoloGeneARHGEF35
Homology/Alignments : Family Browser (UCSC)ARHGEF35
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARHGEF35 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARHGEF35
dbVarARHGEF35
ClinVarARHGEF35
1000_GenomesARHGEF35 
Exome Variant ServerARHGEF35
ExAC (Exome Aggregation Consortium)ARHGEF35 (select the gene name)
Genetic variants : HAPMAP445328
Genomic Variants (DGV)ARHGEF35 [DGVbeta]
DECIPHER (Syndromes)7:143883176-143892791  ENSG00000213214
CONAN: Copy Number AnalysisARHGEF35 
Mutations
ICGC Data PortalARHGEF35 
TCGA Data PortalARHGEF35 
Broad Tumor PortalARHGEF35
OASIS PortalARHGEF35 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARHGEF35  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARHGEF35
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARHGEF35
DgiDB (Drug Gene Interaction Database)ARHGEF35
DoCM (Curated mutations)ARHGEF35 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARHGEF35 (select a term)
intoGenARHGEF35
Cancer3DARHGEF35(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenARHGEF35
Genetic Testing Registry ARHGEF35
NextProtA5YM69 [Medical]
TSGene445328
GENETestsARHGEF35
Huge Navigator ARHGEF35 [HugePedia]
snp3D : Map Gene to Disease445328
BioCentury BCIQARHGEF35
ClinGenARHGEF35
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD445328
Chemical/Pharm GKB GenePA165617645
Clinical trialARHGEF35
Miscellaneous
canSAR (ICR)ARHGEF35 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARHGEF35
EVEXARHGEF35
GoPubMedARHGEF35
iHOPARHGEF35
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:54:53 CET 2017

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