Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ARHGEF35 (Rho guanine nucleotide exchange factor 35)

Identity

Alias (NCBI)ARHGEF5L
HGNC (Hugo) ARHGEF35
HGNC Alias symbFLJ43692
CTAGE4
HGNC Previous nameARHGEF5L
HGNC Previous nameRho guanine nucleotide exchange factor (GEF) 5-like
 Rho guanine nucleotide exchange factor (GEF) 35
LocusID (NCBI) 445328
Atlas_Id 60478
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 144186083 and ends at 144195879 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ARHGEF35   33846
Cards
Entrez_Gene (NCBI)ARHGEF35    Rho guanine nucleotide exchange factor 35
AliasesARHGEF5L
GeneCards (Weizmann)ARHGEF35
Ensembl hg19 (Hinxton)ENSG00000213214 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213214 [Gene_View]  ENSG00000213214 [Sequence]  chr7:144186083-144195879 [Contig_View]  ARHGEF35 [Vega]
ICGC DataPortalENSG00000213214
TCGA cBioPortalARHGEF35
AceView (NCBI)ARHGEF35
Genatlas (Paris)ARHGEF35
SOURCE (Princeton)ARHGEF35
Genetics Home Reference (NIH)ARHGEF35
Genomic and cartography
GoldenPath hg38 (UCSC)ARHGEF35  -     chr7:144186083-144195879 -  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARHGEF35  -     7q35   [Description]    (hg19-Feb_2009)
GoldenPathARHGEF35 - 7q35 [CytoView hg19]  ARHGEF35 - 7q35 [CytoView hg38]
ImmunoBaseENSG00000213214
Genome Data Viewer NCBIARHGEF35 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK125680 BC136868 BC136878 DA646728 DQ786206
RefSeq transcript (Entrez)NM_001003702 NM_001368318
Consensus coding sequences : CCDS (NCBI)ARHGEF35
Gene ExpressionARHGEF35 [ NCBI-GEO ]   ARHGEF35 [ EBI - ARRAY_EXPRESS ]   ARHGEF35 [ SEEK ]   ARHGEF35 [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGEF35 [ Firebrowse - Broad ]
GenevisibleExpression of ARHGEF35 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)445328
GTEX Portal (Tissue expression)ARHGEF35
Human Protein AtlasENSG00000213214-ARHGEF35 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA5YM69   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA5YM69  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA5YM69
PhosPhoSitePlusA5YM69
Domains : Interpro (EBI)ARHGEF5/35_N   
Domain families : Pfam (Sanger)ARHGEF5_35 (PF15441)   
Domain families : Pfam (NCBI)pfam15441   
Conserved Domain (NCBI)ARHGEF35
SuperfamilyA5YM69
AlphaFold pdb e-kbA5YM69   
Human Protein Atlas [tissue]ENSG00000213214-ARHGEF35 [tissue]
HPRD13476
Protein Interaction databases
DIP (DOE-UCLA)A5YM69
IntAct (EBI)A5YM69
BioGRIDARHGEF35
STRING (EMBL)ARHGEF35
ZODIACARHGEF35
Ontologies - Pathways
QuickGOA5YM69
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkARHGEF35
Atlas of Cancer Signalling NetworkARHGEF35
Wikipedia pathwaysARHGEF35
Orthology - Evolution
OrthoDB445328
GeneTree (enSembl)ENSG00000213214
Phylogenetic Trees/Animal Genes : TreeFamARHGEF35
Homologs : HomoloGeneARHGEF35
Homology/Alignments : Family Browser (UCSC)ARHGEF35
Gene fusions - Rearrangements
Fusion : QuiverARHGEF35
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARHGEF35 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARHGEF35
dbVarARHGEF35
ClinVarARHGEF35
MonarchARHGEF35
1000_GenomesARHGEF35 
Exome Variant ServerARHGEF35
GNOMAD BrowserENSG00000213214
Varsome BrowserARHGEF35
ACMGARHGEF35 variants
VarityA5YM69
Genomic Variants (DGV)ARHGEF35 [DGVbeta]
DECIPHERARHGEF35 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARHGEF35 
Mutations
ICGC Data PortalARHGEF35 
TCGA Data PortalARHGEF35 
Broad Tumor PortalARHGEF35
OASIS PortalARHGEF35 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARHGEF35  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DARHGEF35
Mutations and Diseases : HGMDARHGEF35
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaARHGEF35
DgiDB (Drug Gene Interaction Database)ARHGEF35
DoCM (Curated mutations)ARHGEF35
CIViC (Clinical Interpretations of Variants in Cancer)ARHGEF35
Cancer3DARHGEF35
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETARHGEF35
MedgenARHGEF35
Genetic Testing Registry ARHGEF35
NextProtA5YM69 [Medical]
GENETestsARHGEF35
Target ValidationARHGEF35
Huge Navigator ARHGEF35 [HugePedia]
ClinGenARHGEF35
Clinical trials, drugs, therapy
MyCancerGenomeARHGEF35
Protein Interactions : CTDARHGEF35
Pharm GKB GenePA165617645
PharosA5YM69
Clinical trialARHGEF35
Miscellaneous
canSAR (ICR)ARHGEF35
HarmonizomeARHGEF35
DataMed IndexARHGEF35
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXARHGEF35
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:42:30 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.