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ARL10 (ADP-ribosylation factor-like 10)

Identity

Alias_namesARL10A
ADP-ribosylation factor-like 10A
ADP-ribosylation factor like GTPase 10
Other alias
HGNC (Hugo) ARL10
LocusID (NCBI) 285598
Atlas_Id 60489
Location 5q35.2  [Link to chromosome band 5q35]
Location_base_pair Starts at 175792502 and ends at 175800503 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ARL10 (5q35.2) / TRPM3 (9q21.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARL10   22042
Cards
Entrez_Gene (NCBI)ARL10  285598  ADP-ribosylation factor-like 10
AliasesARL10A
GeneCards (Weizmann)ARL10
Ensembl hg19 (Hinxton) [Gene_View]  chr5:175792502-175800503 [Contig_View]  ARL10 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:175792502-175800503 [Contig_View]  ARL10 [Vega]
TCGA cBioPortalARL10
AceView (NCBI)ARL10
Genatlas (Paris)ARL10
WikiGenes285598
SOURCE (Princeton)ARL10
Genetics Home Reference (NIH)ARL10
Genomic and cartography
GoldenPath hg19 (UCSC)ARL10  -     chr5:175792502-175800503 +  5q35.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ARL10  -     5q35.2   [Description]    (hg38-Dec_2013)
EnsemblARL10 - 5q35.2 [CytoView hg19]  ARL10 - 5q35.2 [CytoView hg38]
Mapping of homologs : NCBIARL10 [Mapview hg19]  ARL10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC059361 DR001833
RefSeq transcript (Entrez)NM_173664
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_023133 NW_004929325
Consensus coding sequences : CCDS (NCBI)ARL10
Cluster EST : UnigeneHs.424552 [ NCBI ]
CGAP (NCI)Hs.424552
Gene ExpressionARL10 [ NCBI-GEO ]   ARL10 [ EBI - ARRAY_EXPRESS ]   ARL10 [ SEEK ]   ARL10 [ MEM ]
Gene Expression Viewer (FireBrowse)ARL10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285598
GTEX Portal (Tissue expression)ARL10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8L6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8L6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8L6
Splice isoforms : SwissVarQ8N8L6
PhosPhoSitePlusQ8N8L6
Domaine pattern : Prosite (Expaxy)ARF (PS51417)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTPase_ARF    Small_GTPase_ARF/SAR   
Domain families : Pfam (Sanger)Arf (PF00025)   
Domain families : Pfam (NCBI)pfam00025   
Conserved Domain (NCBI)ARL10
DMDM Disease mutations285598
Blocks (Seattle)ARL10
SuperfamilyQ8N8L6
Peptide AtlasQ8N8L6
HPRD12482
IPIIPI00167501   IPI00967291   IPI00967184   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8L6
IntAct (EBI)Q8N8L6
BioGRIDARL10
STRING (EMBL)ARL10
ZODIACARL10
Ontologies - Pathways
QuickGOQ8N8L6
Ontology : AmiGOGTP binding  intracellular  small GTPase mediated signal transduction  
Ontology : EGO-EBIGTP binding  intracellular  small GTPase mediated signal transduction  
NDEx NetworkARL10
Atlas of Cancer Signalling NetworkARL10
Wikipedia pathwaysARL10
Orthology - Evolution
OrthoDB285598
Phylogenetic Trees/Animal Genes : TreeFamARL10
HOVERGENQ8N8L6
HOGENOMQ8N8L6
Homologs : HomoloGeneARL10
Homology/Alignments : Family Browser (UCSC)ARL10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARL10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARL10
dbVarARL10
ClinVarARL10
1000_GenomesARL10 
Exome Variant ServerARL10
ExAC (Exome Aggregation Consortium)ARL10 (select the gene name)
Genetic variants : HAPMAP285598
Genomic Variants (DGV)ARL10 [DGVbeta]
DECIPHER (Syndromes)5:175792502-175800503  
CONAN: Copy Number AnalysisARL10 
Mutations
ICGC Data PortalARL10 
TCGA Data PortalARL10 
Broad Tumor PortalARL10
OASIS PortalARL10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARL10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARL10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARL10
DgiDB (Drug Gene Interaction Database)ARL10
DoCM (Curated mutations)ARL10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARL10 (select a term)
intoGenARL10
Cancer3DARL10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenARL10
Genetic Testing Registry ARL10
NextProtQ8N8L6 [Medical]
TSGene285598
GENETestsARL10
Huge Navigator ARL10 [HugePedia]
snp3D : Map Gene to Disease285598
BioCentury BCIQARL10
ClinGenARL10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285598
Chemical/Pharm GKB GenePA134871031
Clinical trialARL10
Miscellaneous
canSAR (ICR)ARL10 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARL10
EVEXARL10
GoPubMedARL10
iHOPARL10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:54:56 CET 2017

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