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ARL14EP (ADP ribosylation factor like GTPase 14 effector protein)

Identity

Alias_namesC11orf46
chromosome 11 open reading frame 46
ADP-ribosylation factor like GTPase 14 effector protein
Alias_symbol (synonym)FLJ38968
ARF7EP
Other aliasdJ299F11.1
HGNC (Hugo) ARL14EP
LocusID (NCBI) 120534
Atlas_Id 60492
Location 11p14.1  [Link to chromosome band 11p14]
Location_base_pair Starts at 30323099 and ends at 30338223 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SLC25A12 (2q31.1) / ARL14EP (11p14.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARL14EP   26798
LRG (Locus Reference Genomic)LRG_881
Cards
Entrez_Gene (NCBI)ARL14EP  120534  ADP ribosylation factor like GTPase 14 effector protein
AliasesARF7EP; C11orf46; dJ299F11.1
GeneCards (Weizmann)ARL14EP
Ensembl hg19 (Hinxton)ENSG00000152219 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000152219 [Gene_View]  chr11:30323099-30338223 [Contig_View]  ARL14EP [Vega]
ICGC DataPortalENSG00000152219
TCGA cBioPortalARL14EP
AceView (NCBI)ARL14EP
Genatlas (Paris)ARL14EP
WikiGenes120534
SOURCE (Princeton)ARL14EP
Genetics Home Reference (NIH)ARL14EP
Genomic and cartography
GoldenPath hg38 (UCSC)ARL14EP  -     chr11:30323099-30338223 +  11p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARL14EP  -     11p14.1   [Description]    (hg19-Feb_2009)
EnsemblARL14EP - 11p14.1 [CytoView hg19]  ARL14EP - 11p14.1 [CytoView hg38]
Mapping of homologs : NCBIARL14EP [Mapview hg19]  ARL14EP [Mapview hg38]
OMIM612295   
Gene and transcription
Genbank (Entrez)AK096287 AK127509 AV714521 BC047775 BM674118
RefSeq transcript (Entrez)NM_152316
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARL14EP
Cluster EST : UnigeneHs.502208 [ NCBI ]
CGAP (NCI)Hs.502208
Alternative Splicing GalleryENSG00000152219
Gene ExpressionARL14EP [ NCBI-GEO ]   ARL14EP [ EBI - ARRAY_EXPRESS ]   ARL14EP [ SEEK ]   ARL14EP [ MEM ]
Gene Expression Viewer (FireBrowse)ARL14EP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)120534
GTEX Portal (Tissue expression)ARL14EP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8R7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8R7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8R7
Splice isoforms : SwissVarQ8N8R7
PhosPhoSitePlusQ8N8R7
Domains : Interpro (EBI)ARF7EP_C    ARL14EP   
Domain families : Pfam (Sanger)ARF7EP_C (PF14949)   
Domain families : Pfam (NCBI)pfam14949   
Conserved Domain (NCBI)ARL14EP
DMDM Disease mutations120534
Blocks (Seattle)ARL14EP
SuperfamilyQ8N8R7
Human Protein AtlasENSG00000152219
Peptide AtlasQ8N8R7
HPRD08796
IPIIPI00167549   IPI00982903   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8R7
IntAct (EBI)Q8N8R7
FunCoupENSG00000152219
BioGRIDARL14EP
STRING (EMBL)ARL14EP
ZODIACARL14EP
Ontologies - Pathways
QuickGOQ8N8R7
Ontology : AmiGOprotein binding  nucleus  nucleolus  cytosol  plasma membrane  focal adhesion  intracellular membrane-bounded organelle  
Ontology : EGO-EBIprotein binding  nucleus  nucleolus  cytosol  plasma membrane  focal adhesion  intracellular membrane-bounded organelle  
NDEx NetworkARL14EP
Atlas of Cancer Signalling NetworkARL14EP
Wikipedia pathwaysARL14EP
Orthology - Evolution
OrthoDB120534
GeneTree (enSembl)ENSG00000152219
Phylogenetic Trees/Animal Genes : TreeFamARL14EP
HOVERGENQ8N8R7
HOGENOMQ8N8R7
Homologs : HomoloGeneARL14EP
Homology/Alignments : Family Browser (UCSC)ARL14EP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARL14EP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARL14EP
dbVarARL14EP
ClinVarARL14EP
1000_GenomesARL14EP 
Exome Variant ServerARL14EP
ExAC (Exome Aggregation Consortium)ARL14EP (select the gene name)
Genetic variants : HAPMAP120534
Genomic Variants (DGV)ARL14EP [DGVbeta]
DECIPHERARL14EP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARL14EP 
Mutations
ICGC Data PortalARL14EP 
TCGA Data PortalARL14EP 
Broad Tumor PortalARL14EP
OASIS PortalARL14EP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDARL14EP
BioMutasearch ARL14EP
DgiDB (Drug Gene Interaction Database)ARL14EP
DoCM (Curated mutations)ARL14EP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARL14EP (select a term)
intoGenARL14EP
Cancer3DARL14EP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612295   
Orphanet
MedgenARL14EP
Genetic Testing Registry ARL14EP
NextProtQ8N8R7 [Medical]
TSGene120534
GENETestsARL14EP
Target ValidationARL14EP
Huge Navigator ARL14EP [HugePedia]
snp3D : Map Gene to Disease120534
BioCentury BCIQARL14EP
ClinGenARL14EP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD120534
Chemical/Pharm GKB GenePA142672291
Clinical trialARL14EP
Miscellaneous
canSAR (ICR)ARL14EP (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARL14EP
EVEXARL14EP
GoPubMedARL14EP
iHOPARL14EP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:44 CEST 2017

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