Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ARL2-SNX15 (ARL2-SNX15 readthrough (NMD candidate))


Alias (NCBI)-
HGNC (Hugo) ARL2-SNX15
LocusID (NCBI) 100528018
Atlas_Id 60497
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 65014113 and ends at 65040572 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)ARL2-SNX15   49197
Entrez_Gene (NCBI)ARL2-SNX15    ARL2-SNX15 readthrough (NMD candidate)
GeneCards (Weizmann)ARL2-SNX15
Ensembl hg19 (Hinxton)ENSG00000273003 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000273003 [Gene_View]  ENSG00000273003 [Sequence]  chr11:65014113-65040572 [Contig_View]  ARL2-SNX15 [Vega]
ICGC DataPortalENSG00000273003
TCGA cBioPortalARL2-SNX15
AceView (NCBI)ARL2-SNX15
Genatlas (Paris)ARL2-SNX15
SOURCE (Princeton)ARL2-SNX15
Genetics Home Reference (NIH)ARL2-SNX15
Genomic and cartography
GoldenPath hg38 (UCSC)ARL2-SNX15  -     chr11:65014113-65040572 +  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARL2-SNX15  -     11q13.1   [Description]    (hg19-Feb_2009)
GoldenPathARL2-SNX15 - 11q13.1 [CytoView hg19]  ARL2-SNX15 - 11q13.1 [CytoView hg38]
genome Data Viewer NCBIARL2-SNX15 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK096447
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARL2-SNX15
Alternative Splicing GalleryENSG00000273003
Gene ExpressionARL2-SNX15 [ NCBI-GEO ]   ARL2-SNX15 [ EBI - ARRAY_EXPRESS ]   ARL2-SNX15 [ SEEK ]   ARL2-SNX15 [ MEM ]
Gene Expression Viewer (FireBrowse)ARL2-SNX15 [ Firebrowse - Broad ]
GenevisibleExpression of ARL2-SNX15 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100528018
GTEX Portal (Tissue expression)ARL2-SNX15
Human Protein AtlasENSG00000273003-ARL2-SNX15 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARL2-SNX15
Blocks (Seattle)ARL2-SNX15
Human Protein Atlas [tissue]ENSG00000273003-ARL2-SNX15 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 16:46:15 CET 2020

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