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ARL9 (ADP-ribosylation factor-like 9)

Identity

Alias_namesADP-ribosylation factor like GTPase 9
Other alias-
HGNC (Hugo) ARL9
LocusID (NCBI) 132946
Atlas_Id 60506
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 57371375 and ends at 57390058 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARL9   23592
Cards
Entrez_Gene (NCBI)ARL9  132946  ADP-ribosylation factor-like 9
Aliases
GeneCards (Weizmann)ARL9
Ensembl hg19 (Hinxton) [Gene_View]  chr4:57371375-57390058 [Contig_View]  ARL9 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:57371375-57390058 [Contig_View]  ARL9 [Vega]
TCGA cBioPortalARL9
AceView (NCBI)ARL9
Genatlas (Paris)ARL9
WikiGenes132946
SOURCE (Princeton)ARL9
Genetics Home Reference (NIH)ARL9
Genomic and cartography
GoldenPath hg19 (UCSC)ARL9  -     chr4:57371375-57390058 +  4q12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ARL9  -     4q12   [Description]    (hg38-Dec_2013)
EnsemblARL9 - 4q12 [CytoView hg19]  ARL9 - 4q12 [CytoView hg38]
Mapping of homologs : NCBIARL9 [Mapview hg19]  ARL9 [Mapview hg38]
OMIM612405   
Gene and transcription
Genbank (Entrez)AY439003 BC141542 BC148697
RefSeq transcript (Entrez)NM_206919
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_022853 NW_004929319
Consensus coding sequences : CCDS (NCBI)ARL9
Cluster EST : UnigeneHs.444449 [ NCBI ]
CGAP (NCI)Hs.444449
Gene ExpressionARL9 [ NCBI-GEO ]   ARL9 [ EBI - ARRAY_EXPRESS ]   ARL9 [ SEEK ]   ARL9 [ MEM ]
Gene Expression Viewer (FireBrowse)ARL9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)132946
GTEX Portal (Tissue expression)ARL9
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6T311   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6T311  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6T311
Splice isoforms : SwissVarQ6T311
PhosPhoSitePlusQ6T311
Domaine pattern : Prosite (Expaxy)ARF (PS51417)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase_ARF    Small_GTPase_ARF/SAR   
Domain families : Pfam (Sanger)Arf (PF00025)   
Domain families : Pfam (NCBI)pfam00025   
Conserved Domain (NCBI)ARL9
DMDM Disease mutations132946
Blocks (Seattle)ARL9
SuperfamilyQ6T311
Peptide AtlasQ6T311
HPRD12486
IPIIPI00419109   
Protein Interaction databases
DIP (DOE-UCLA)Q6T311
IntAct (EBI)Q6T311
BioGRIDARL9
STRING (EMBL)ARL9
ZODIACARL9
Ontologies - Pathways
QuickGOQ6T311
Ontology : AmiGOGTP binding  intracellular  small GTPase mediated signal transduction  
Ontology : EGO-EBIGTP binding  intracellular  small GTPase mediated signal transduction  
NDEx NetworkARL9
Atlas of Cancer Signalling NetworkARL9
Wikipedia pathwaysARL9
Orthology - Evolution
OrthoDB132946
Phylogenetic Trees/Animal Genes : TreeFamARL9
HOVERGENQ6T311
HOGENOMQ6T311
Homologs : HomoloGeneARL9
Homology/Alignments : Family Browser (UCSC)ARL9
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARL9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARL9
dbVarARL9
ClinVarARL9
1000_GenomesARL9 
Exome Variant ServerARL9
ExAC (Exome Aggregation Consortium)ARL9 (select the gene name)
Genetic variants : HAPMAP132946
Genomic Variants (DGV)ARL9 [DGVbeta]
DECIPHER (Syndromes)4:57371375-57390058  
CONAN: Copy Number AnalysisARL9 
Mutations
ICGC Data PortalARL9 
TCGA Data PortalARL9 
Broad Tumor PortalARL9
OASIS PortalARL9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARL9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARL9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARL9
DgiDB (Drug Gene Interaction Database)ARL9
DoCM (Curated mutations)ARL9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARL9 (select a term)
intoGenARL9
Cancer3DARL9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612405   
Orphanet
MedgenARL9
Genetic Testing Registry ARL9
NextProtQ6T311 [Medical]
TSGene132946
GENETestsARL9
Huge Navigator ARL9 [HugePedia]
snp3D : Map Gene to Disease132946
BioCentury BCIQARL9
ClinGenARL9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD132946
Chemical/Pharm GKB GenePA134987258
Clinical trialARL9
Miscellaneous
canSAR (ICR)ARL9 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARL9
EVEXARL9
GoPubMedARL9
iHOPARL9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:54:59 CET 2017

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