Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ARMH4 (armadillo like helical domain containing 4)

Identity

Other aliasC14orf37
UT2
c14_5376
HGNC (Hugo) ARMH4
LocusID (NCBI) 145407
Atlas_Id 80373
Location 14q23.1  [Link to chromosome band 14q23]
Location_base_pair Starts at 58116146 and ends at 58152239 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ARMH4   19846
Cards
Entrez_Gene (NCBI)ARMH4  145407  armadillo like helical domain containing 4
AliasesC14orf37; UT2; c14_5376
GeneCards (Weizmann)ARMH4
Ensembl hg19 (Hinxton)ENSG00000139971 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000139971 [Gene_View]  ENSG00000139971 [Sequence]  chr14:58116146-58152239 [Contig_View]  ARMH4 [Vega]
ICGC DataPortalENSG00000139971
TCGA cBioPortalARMH4
AceView (NCBI)ARMH4
Genatlas (Paris)ARMH4
WikiGenes145407
SOURCE (Princeton)ARMH4
Genetics Home Reference (NIH)ARMH4
Genomic and cartography
GoldenPath hg38 (UCSC)ARMH4  -     chr14:58116146-58152239 -  14q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARMH4  -     14q23.1   [Description]    (hg19-Feb_2009)
GoldenPathARMH4 - 14q23.1 [CytoView hg19]  ARMH4 - 14q23.1 [CytoView hg38]
ImmunoBaseENSG00000139971
Mapping of homologs : NCBIARMH4 [Mapview hg19]  ARMH4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK292513 AK292605 AK294599 BC013707 BC031314
RefSeq transcript (Entrez)NM_001001872 NM_001320173
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARMH4
Cluster EST : UnigeneHs.535420 [ NCBI ]
CGAP (NCI)Hs.535420
Alternative Splicing GalleryENSG00000139971
Gene ExpressionARMH4 [ NCBI-GEO ]   ARMH4 [ EBI - ARRAY_EXPRESS ]   ARMH4 [ SEEK ]   ARMH4 [ MEM ]
Gene Expression Viewer (FireBrowse)ARMH4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145407
GTEX Portal (Tissue expression)ARMH4
Human Protein AtlasENSG00000139971-ARMH4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86TY3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86TY3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86TY3
Splice isoforms : SwissVarQ86TY3
PhosPhoSitePlusQ86TY3
Domains : Interpro (EBI)DUF4696   
Domain families : Pfam (Sanger)DUF4696 (PF15767)   
Domain families : Pfam (NCBI)pfam15767   
Conserved Domain (NCBI)ARMH4
DMDM Disease mutations145407
Blocks (Seattle)ARMH4
SuperfamilyQ86TY3
Human Protein Atlas [tissue]ENSG00000139971-ARMH4 [tissue]
Peptide AtlasQ86TY3
IPIIPI00942872   IPI00384174   IPI00787835   IPI00165125   
Protein Interaction databases
DIP (DOE-UCLA)Q86TY3
IntAct (EBI)Q86TY3
FunCoupENSG00000139971
BioGRIDARMH4
STRING (EMBL)ARMH4
ZODIACARMH4
Ontologies - Pathways
QuickGOQ86TY3
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkARMH4
Atlas of Cancer Signalling NetworkARMH4
Wikipedia pathwaysARMH4
Orthology - Evolution
OrthoDB145407
GeneTree (enSembl)ENSG00000139971
Phylogenetic Trees/Animal Genes : TreeFamARMH4
HOGENOMQ86TY3
Homologs : HomoloGeneARMH4
Homology/Alignments : Family Browser (UCSC)ARMH4
Gene fusions - Rearrangements
Fusion : QuiverARMH4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARMH4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARMH4
dbVarARMH4
ClinVarARMH4
1000_GenomesARMH4 
Exome Variant ServerARMH4
ExAC (Exome Aggregation Consortium)ENSG00000139971
GNOMAD BrowserENSG00000139971
Varsome BrowserARMH4
Genetic variants : HAPMAP145407
Genomic Variants (DGV)ARMH4 [DGVbeta]
DECIPHERARMH4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARMH4 
Mutations
ICGC Data PortalARMH4 
TCGA Data PortalARMH4 
Broad Tumor PortalARMH4
OASIS PortalARMH4 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDARMH4
BioMutasearch ARMH4
DgiDB (Drug Gene Interaction Database)ARMH4
DoCM (Curated mutations)ARMH4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARMH4 (select a term)
intoGenARMH4
Cancer3DARMH4(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETARMH4
MedgenARMH4
Genetic Testing Registry ARMH4
NextProtQ86TY3 [Medical]
TSGene145407
GENETestsARMH4
Target ValidationARMH4
Huge Navigator ARMH4 [HugePedia]
snp3D : Map Gene to Disease145407
BioCentury BCIQARMH4
ClinGenARMH4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145407
Chemical/Pharm GKB GenePA134941886
Clinical trialARMH4
Miscellaneous
canSAR (ICR)ARMH4 (select the gene name)
DataMed IndexARMH4
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARMH4
EVEXARMH4
GoPubMedARMH4
iHOPARMH4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:19:57 CEST 2019

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