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ARPC4-TTLL3 (ARPC4-TTLL3 readthrough)

Identity

Other alias-
HGNC (Hugo) ARPC4-TTLL3
LocusID (NCBI) 100526693
Atlas_Id 60522
Location 3p25.3  [Link to chromosome band 3p25]
Location_base_pair Starts at 9792548 and ends at 9836356 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ARPC4-TTLL3 (3p25.3) / ARPC4-TTLL3 (3p25.3)ARPC4-TTLL3 (3p25.3) / FEM1A (19p13.3)ARPC4-TTLL3 (3p25.3) / GRIA2 (4q32.1)
ARPC4-TTLL3 (3p25.3) / GRM7 (3p26.1)ARPC4-TTLL3 (3p25.3) / INTS1 (7p22.3)FBXL18 (7p22.1) / ARPC4-TTLL3 (3p25.3)
RCBTB2 (13q14.2) / ARPC4-TTLL3 (3p25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARPC4-TTLL3   38830
Cards
Entrez_Gene (NCBI)ARPC4-TTLL3  100526693  ARPC4-TTLL3 readthrough
Aliases
GeneCards (Weizmann)ARPC4-TTLL3
Ensembl hg19 (Hinxton)ENSG00000250151 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250151 [Gene_View]  chr3:9792548-9836356 [Contig_View]  ARPC4-TTLL3 [Vega]
ICGC DataPortalENSG00000250151
TCGA cBioPortalARPC4-TTLL3
AceView (NCBI)ARPC4-TTLL3
Genatlas (Paris)ARPC4-TTLL3
WikiGenes100526693
SOURCE (Princeton)ARPC4-TTLL3
Genetics Home Reference (NIH)ARPC4-TTLL3
Genomic and cartography
GoldenPath hg38 (UCSC)ARPC4-TTLL3  -     chr3:9792548-9836356 +  3p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARPC4-TTLL3  -     3p25.3   [Description]    (hg19-Feb_2009)
EnsemblARPC4-TTLL3 - 3p25.3 [CytoView hg19]  ARPC4-TTLL3 - 3p25.3 [CytoView hg38]
Mapping of homologs : NCBIARPC4-TTLL3 [Mapview hg19]  ARPC4-TTLL3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024110 BC025289
RefSeq transcript (Entrez)NM_001198793
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARPC4-TTLL3
Cluster EST : UnigeneHs.323342 [ NCBI ]
CGAP (NCI)Hs.323342
Alternative Splicing GalleryENSG00000250151
Gene ExpressionARPC4-TTLL3 [ NCBI-GEO ]   ARPC4-TTLL3 [ EBI - ARRAY_EXPRESS ]   ARPC4-TTLL3 [ SEEK ]   ARPC4-TTLL3 [ MEM ]
Gene Expression Viewer (FireBrowse)ARPC4-TTLL3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100526693
GTEX Portal (Tissue expression)ARPC4-TTLL3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARPC4-TTLL3
DMDM Disease mutations100526693
Blocks (Seattle)ARPC4-TTLL3
Human Protein AtlasENSG00000250151
IPIIPI00554811   IPI00386354   IPI00925334   IPI00924833   IPI00925052   IPI00926232   IPI00925522   IPI00607772   
Protein Interaction databases
FunCoupENSG00000250151
BioGRIDARPC4-TTLL3
STRING (EMBL)ARPC4-TTLL3
ZODIACARPC4-TTLL3
Ontologies - Pathways
Huge Navigator ARPC4-TTLL3 [HugePedia]
snp3D : Map Gene to Disease100526693
BioCentury BCIQARPC4-TTLL3
ClinGenARPC4-TTLL3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100526693
Clinical trialARPC4-TTLL3
Miscellaneous
canSAR (ICR)ARPC4-TTLL3 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARPC4-TTLL3
EVEXARPC4-TTLL3
GoPubMedARPC4-TTLL3
iHOPARPC4-TTLL3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:47 CEST 2017

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