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ARPP19 (cAMP regulated phosphoprotein 19kDa)

Identity

Alias_namescAMP-regulated phosphoprotein
Alias_symbol (synonym)ARPP-19
ARPP-16
ARPP16
ENSAL
Other alias
HGNC (Hugo) ARPP19
LocusID (NCBI) 10776
Atlas_Id 52166
Location 15q21.2  [Link to chromosome band 15q21]
Location_base_pair Starts at 52839242 and ends at 52861643 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
LOC100130950 (17p13.2) / ARPP19 (15q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARPP19   16967
Cards
Entrez_Gene (NCBI)ARPP19  10776  cAMP regulated phosphoprotein 19kDa
AliasesARPP-16; ARPP-19; ARPP16; ENSAL
GeneCards (Weizmann)ARPP19
Ensembl hg19 (Hinxton)ENSG00000128989 [Gene_View]  chr15:52839242-52861643 [Contig_View]  ARPP19 [Vega]
Ensembl hg38 (Hinxton)ENSG00000128989 [Gene_View]  chr15:52839242-52861643 [Contig_View]  ARPP19 [Vega]
ICGC DataPortalENSG00000128989
TCGA cBioPortalARPP19
AceView (NCBI)ARPP19
Genatlas (Paris)ARPP19
WikiGenes10776
SOURCE (Princeton)ARPP19
Genetics Home Reference (NIH)ARPP19
Genomic and cartography
GoldenPath hg19 (UCSC)ARPP19  -     chr15:52839242-52861643 -  15q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ARPP19  -     15q21.2   [Description]    (hg38-Dec_2013)
EnsemblARPP19 - 15q21.2 [CytoView hg19]  ARPP19 - 15q21.2 [CytoView hg38]
Mapping of homologs : NCBIARPP19 [Mapview hg19]  ARPP19 [Mapview hg38]
OMIM605487   
Gene and transcription
Genbank (Entrez)AF084555 AJ223091 AK023195 AK123616 AK311751
RefSeq transcript (Entrez)NM_001306191 NM_001306195 NM_001306196 NM_006628
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929398
Consensus coding sequences : CCDS (NCBI)ARPP19
Cluster EST : UnigeneHs.512908 [ NCBI ]
CGAP (NCI)Hs.512908
Alternative Splicing GalleryENSG00000128989
Gene ExpressionARPP19 [ NCBI-GEO ]   ARPP19 [ EBI - ARRAY_EXPRESS ]   ARPP19 [ SEEK ]   ARPP19 [ MEM ]
Gene Expression Viewer (FireBrowse)ARPP19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10776
GTEX Portal (Tissue expression)ARPP19
Protein : pattern, domain, 3D structure
UniProt/SwissProtP56211   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP56211  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP56211
Splice isoforms : SwissVarP56211
PhosPhoSitePlusP56211
Domains : Interpro (EBI)Endosulphine   
Domain families : Pfam (Sanger)Endosulfine (PF04667)   
Domain families : Pfam (NCBI)pfam04667   
Conserved Domain (NCBI)ARPP19
DMDM Disease mutations10776
Blocks (Seattle)ARPP19
SuperfamilyP56211
Human Protein AtlasENSG00000128989
Peptide AtlasP56211
HPRD09264
IPIIPI00328526   IPI00745466   
Protein Interaction databases
DIP (DOE-UCLA)P56211
IntAct (EBI)P56211
FunCoupENSG00000128989
BioGRIDARPP19
STRING (EMBL)ARPP19
ZODIACARPP19
Ontologies - Pathways
QuickGOP56211
Ontology : AmiGOG2/M transition of mitotic cell cycle  protein phosphatase inhibitor activity  receptor binding  nucleoplasm  cytoplasm  mitotic nuclear division  protein phosphatase type 2A regulator activity  potassium channel regulator activity  phosphatase inhibitor activity  regulation of protein phosphatase type 2A activity  negative regulation of catalytic activity  negative regulation of catalytic activity  positive regulation of gluconeogenesis  positive regulation of glucose import  cell division  protein phosphatase 2A binding  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  protein phosphatase inhibitor activity  receptor binding  nucleoplasm  cytoplasm  mitotic nuclear division  protein phosphatase type 2A regulator activity  potassium channel regulator activity  phosphatase inhibitor activity  regulation of protein phosphatase type 2A activity  negative regulation of catalytic activity  negative regulation of catalytic activity  positive regulation of gluconeogenesis  positive regulation of glucose import  cell division  protein phosphatase 2A binding  
NDEx NetworkARPP19
Atlas of Cancer Signalling NetworkARPP19
Wikipedia pathwaysARPP19
Orthology - Evolution
OrthoDB10776
GeneTree (enSembl)ENSG00000128989
Phylogenetic Trees/Animal Genes : TreeFamARPP19
HOVERGENP56211
HOGENOMP56211
Homologs : HomoloGeneARPP19
Homology/Alignments : Family Browser (UCSC)ARPP19
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARPP19 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARPP19
dbVarARPP19
ClinVarARPP19
1000_GenomesARPP19 
Exome Variant ServerARPP19
ExAC (Exome Aggregation Consortium)ARPP19 (select the gene name)
Genetic variants : HAPMAP10776
Genomic Variants (DGV)ARPP19 [DGVbeta]
DECIPHER (Syndromes)15:52839242-52861643  ENSG00000128989
CONAN: Copy Number AnalysisARPP19 
Mutations
ICGC Data PortalARPP19 
TCGA Data PortalARPP19 
Broad Tumor PortalARPP19
OASIS PortalARPP19 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARPP19  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARPP19
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARPP19
DgiDB (Drug Gene Interaction Database)ARPP19
DoCM (Curated mutations)ARPP19 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARPP19 (select a term)
intoGenARPP19
Cancer3DARPP19(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605487   
Orphanet
MedgenARPP19
Genetic Testing Registry ARPP19
NextProtP56211 [Medical]
TSGene10776
GENETestsARPP19
Huge Navigator ARPP19 [HugePedia]
snp3D : Map Gene to Disease10776
BioCentury BCIQARPP19
ClinGenARPP19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10776
Chemical/Pharm GKB GenePA165478498
Clinical trialARPP19
Miscellaneous
canSAR (ICR)ARPP19 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARPP19
EVEXARPP19
GoPubMedARPP19
iHOPARPP19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:56:37 CET 2017

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