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ARR3 (arrestin 3)

Identity

Alias_namesarrestin 3, retinal (X-arrestin)
arrestin 3 retinal (X-arrestin)
Alias_symbol (synonym)ARRX
Other aliascArr
HGNC (Hugo) ARR3
LocusID (NCBI) 407
Atlas_Id 50226
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 70268335 and ends at 70281840 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ELL3 (15q15.3) / ARR3 (Xq13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARR3   710
Cards
Entrez_Gene (NCBI)ARR3  407  arrestin 3
AliasesARRX; cArr
GeneCards (Weizmann)ARR3
Ensembl hg19 (Hinxton)ENSG00000120500 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000120500 [Gene_View]  chrX:70268335-70281840 [Contig_View]  ARR3 [Vega]
ICGC DataPortalENSG00000120500
TCGA cBioPortalARR3
AceView (NCBI)ARR3
Genatlas (Paris)ARR3
WikiGenes407
SOURCE (Princeton)ARR3
Genetics Home Reference (NIH)ARR3
Genomic and cartography
GoldenPath hg38 (UCSC)ARR3  -     chrX:70268335-70281840 +  Xq13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARR3  -     Xq13.1   [Description]    (hg19-Feb_2009)
EnsemblARR3 - Xq13.1 [CytoView hg19]  ARR3 - Xq13.1 [CytoView hg38]
Mapping of homologs : NCBIARR3 [Mapview hg19]  ARR3 [Mapview hg38]
OMIM301770   
Gene and transcription
Genbank (Entrez)AF033105 BC012096 BG472156 CR456849 DQ892243
RefSeq transcript (Entrez)NM_004312
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARR3
Cluster EST : UnigeneHs.308 [ NCBI ]
CGAP (NCI)Hs.308
Alternative Splicing GalleryENSG00000120500
Gene ExpressionARR3 [ NCBI-GEO ]   ARR3 [ EBI - ARRAY_EXPRESS ]   ARR3 [ SEEK ]   ARR3 [ MEM ]
Gene Expression Viewer (FireBrowse)ARR3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)407
GTEX Portal (Tissue expression)ARR3
Protein : pattern, domain, 3D structure
UniProt/SwissProtP36575   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP36575  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP36575
Splice isoforms : SwissVarP36575
PhosPhoSitePlusP36575
Domaine pattern : Prosite (Expaxy)ARRESTINS (PS00295)   
Domains : Interpro (EBI)ARR3    Arrestin    Arrestin-like_N    Arrestin_C    Arrestin_C-like    Arrestin_CS    Arrestin_N    Ig_E-set   
Domain families : Pfam (Sanger)Arrestin_C (PF02752)    Arrestin_N (PF00339)   
Domain families : Pfam (NCBI)pfam02752    pfam00339   
Domain families : Smart (EMBL)Arrestin_C (SM01017)  
Conserved Domain (NCBI)ARR3
DMDM Disease mutations407
Blocks (Seattle)ARR3
PDB (SRS)1XEH    2A34   
PDB (PDBSum)1XEH    2A34   
PDB (IMB)1XEH    2A34   
PDB (RSDB)1XEH    2A34   
Structural Biology KnowledgeBase1XEH    2A34   
SCOP (Structural Classification of Proteins)1XEH    2A34   
CATH (Classification of proteins structures)1XEH    2A34   
SuperfamilyP36575
Human Protein AtlasENSG00000120500
Peptide AtlasP36575
HPRD02358
IPIIPI00003917   IPI00644870   IPI00937605   
Protein Interaction databases
DIP (DOE-UCLA)P36575
IntAct (EBI)P36575
FunCoupENSG00000120500
BioGRIDARR3
STRING (EMBL)ARR3
ZODIACARR3
Ontologies - Pathways
QuickGOP36575
Ontology : AmiGOphotoreceptor outer segment  photoreceptor inner segment  regulation of protein phosphorylation  opsin binding  protein binding  cytoplasm  endocytosis  signal transduction  visual perception  synapse  phosphoprotein binding  
Ontology : EGO-EBIphotoreceptor outer segment  photoreceptor inner segment  regulation of protein phosphorylation  opsin binding  protein binding  cytoplasm  endocytosis  signal transduction  visual perception  synapse  phosphoprotein binding  
NDEx NetworkARR3
Atlas of Cancer Signalling NetworkARR3
Wikipedia pathwaysARR3
Orthology - Evolution
OrthoDB407
GeneTree (enSembl)ENSG00000120500
Phylogenetic Trees/Animal Genes : TreeFamARR3
HOVERGENP36575
HOGENOMP36575
Homologs : HomoloGeneARR3
Homology/Alignments : Family Browser (UCSC)ARR3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARR3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARR3
dbVarARR3
ClinVarARR3
1000_GenomesARR3 
Exome Variant ServerARR3
ExAC (Exome Aggregation Consortium)ARR3 (select the gene name)
Genetic variants : HAPMAP407
Genomic Variants (DGV)ARR3 [DGVbeta]
DECIPHERARR3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARR3 
Mutations
ICGC Data PortalARR3 
TCGA Data PortalARR3 
Broad Tumor PortalARR3
OASIS PortalARR3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARR3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARR3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARR3
DgiDB (Drug Gene Interaction Database)ARR3
DoCM (Curated mutations)ARR3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARR3 (select a term)
intoGenARR3
Cancer3DARR3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM301770   
Orphanet
MedgenARR3
Genetic Testing Registry ARR3
NextProtP36575 [Medical]
TSGene407
GENETestsARR3
Huge Navigator ARR3 [HugePedia]
snp3D : Map Gene to Disease407
BioCentury BCIQARR3
ClinGenARR3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD407
Chemical/Pharm GKB GenePA25004
Clinical trialARR3
Miscellaneous
canSAR (ICR)ARR3 (select the gene name)
Probes
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARR3
EVEXARR3
GoPubMedARR3
iHOPARR3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:06:48 CEST 2017

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