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ARSE (arylsulfatase E)

Identity

Alias_namesCDPX
CDPX1
Other aliasASE
CDPXR
HGNC (Hugo) ARSE
LocusID (NCBI) 415
Atlas_Id 55361
Location Xp22.33  [Link to chromosome band Xp22]
Location_base_pair Starts at 2934632 and ends at 2968310 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARSE   719
Cards
Entrez_Gene (NCBI)ARSE  415  arylsulfatase E
AliasesASE; CDPX; CDPX1; CDPXR
GeneCards (Weizmann)ARSE
Ensembl hg19 (Hinxton)ENSG00000157399 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000157399 [Gene_View]  ENSG00000157399 [Sequence]  chrX:2934632-2968310 [Contig_View]  ARSE [Vega]
ICGC DataPortalENSG00000157399
TCGA cBioPortalARSE
AceView (NCBI)ARSE
Genatlas (Paris)ARSE
WikiGenes415
SOURCE (Princeton)ARSE
Genetics Home Reference (NIH)ARSE
Genomic and cartography
GoldenPath hg38 (UCSC)ARSE  -     chrX:2934632-2968310 -  Xp22.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARSE  -     Xp22.33   [Description]    (hg19-Feb_2009)
EnsemblARSE - Xp22.33 [CytoView hg19]  ARSE - Xp22.33 [CytoView hg38]
Mapping of homologs : NCBIARSE [Mapview hg19]  ARSE [Mapview hg38]
OMIM300180   302950   
Gene and transcription
Genbank (Entrez)AK223183 AK223199 AK293648 AK301004 AK313093
RefSeq transcript (Entrez)NM_000047 NM_001282628 NM_001282631
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARSE
Cluster EST : UnigeneHs.386975 [ NCBI ]
CGAP (NCI)Hs.386975
Alternative Splicing GalleryENSG00000157399
Gene ExpressionARSE [ NCBI-GEO ]   ARSE [ EBI - ARRAY_EXPRESS ]   ARSE [ SEEK ]   ARSE [ MEM ]
Gene Expression Viewer (FireBrowse)ARSE [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)415
GTEX Portal (Tissue expression)ARSE
Human Protein AtlasENSG00000157399-ARSE [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP51690   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP51690  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP51690
Splice isoforms : SwissVarP51690
Catalytic activity : Enzyme3.1.6.- [ Enzyme-Expasy ]   3.1.6.-3.1.6.- [ IntEnz-EBI ]   3.1.6.- [ BRENDA ]   3.1.6.- [ KEGG ]   
PhosPhoSitePlusP51690
Domaine pattern : Prosite (Expaxy)SULFATASE_1 (PS00523)    SULFATASE_2 (PS00149)   
Domains : Interpro (EBI)Alkaline_Pase-like_a/b/a    Alkaline_phosphatase_core_sf    Sulfatase_CS    Sulfatase_N   
Domain families : Pfam (Sanger)Sulfatase (PF00884)   
Domain families : Pfam (NCBI)pfam00884   
Conserved Domain (NCBI)ARSE
DMDM Disease mutations415
Blocks (Seattle)ARSE
SuperfamilyP51690
Human Protein Atlas [tissue]ENSG00000157399-ARSE [tissue]
Peptide AtlasP51690
HPRD02171
IPIIPI01014058   IPI00020005   IPI01015579   IPI00640709   
Protein Interaction databases
DIP (DOE-UCLA)P51690
IntAct (EBI)P51690
FunCoupENSG00000157399
BioGRIDARSE
STRING (EMBL)ARSE
ZODIACARSE
Ontologies - Pathways
QuickGOP51690
Ontology : AmiGOskeletal system development  arylsulfatase activity  endoplasmic reticulum lumen  Golgi apparatus  Golgi stack  metal ion binding  extracellular exosome  
Ontology : EGO-EBIskeletal system development  arylsulfatase activity  endoplasmic reticulum lumen  Golgi apparatus  Golgi stack  metal ion binding  extracellular exosome  
NDEx NetworkARSE
Atlas of Cancer Signalling NetworkARSE
Wikipedia pathwaysARSE
Orthology - Evolution
OrthoDB415
GeneTree (enSembl)ENSG00000157399
Phylogenetic Trees/Animal Genes : TreeFamARSE
HOVERGENP51690
HOGENOMP51690
Homologs : HomoloGeneARSE
Homology/Alignments : Family Browser (UCSC)ARSE
Gene fusions - Rearrangements
Fusion : QuiverARSE
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARSE [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARSE
dbVarARSE
ClinVarARSE
1000_GenomesARSE 
Exome Variant ServerARSE
ExAC (Exome Aggregation Consortium)ENSG00000157399
GNOMAD BrowserENSG00000157399
Varsome BrowserARSE
Genetic variants : HAPMAP415
Genomic Variants (DGV)ARSE [DGVbeta]
DECIPHERARSE [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARSE 
Mutations
ICGC Data PortalARSE 
TCGA Data PortalARSE 
Broad Tumor PortalARSE
OASIS PortalARSE [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARSE  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARSE
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch ARSE
DgiDB (Drug Gene Interaction Database)ARSE
DoCM (Curated mutations)ARSE (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARSE (select a term)
intoGenARSE
Cancer3DARSE(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300180    302950   
Orphanet11371   
DisGeNETARSE
MedgenARSE
Genetic Testing Registry ARSE
NextProtP51690 [Medical]
TSGene415
GENETestsARSE
Target ValidationARSE
Huge Navigator ARSE [HugePedia]
snp3D : Map Gene to Disease415
BioCentury BCIQARSE
ClinGenARSE (curated)
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD415
Chemical/Pharm GKB GenePA25010
Clinical trialARSE
Miscellaneous
canSAR (ICR)ARSE (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARSE
EVEXARSE
GoPubMedARSE
iHOPARSE
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 10:52:31 CET 2018

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