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ARSG (arylsulfatase G)

Identity

Alias (NCBI)USH4
HGNC (Hugo) ARSG
HGNC Alias symbKIAA1001
LocusID (NCBI) 22901
Atlas_Id 60535
Location 17q24.2  [Link to chromosome band 17q24]
Location_base_pair Starts at 68259170 and ends at 68422731 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ARSG (17q24.2) / ARSG (17q24.2)ARSG (17q24.2) / CEP112 (17q24.1)ARSG (17q24.2) / TEX2 (17q23.3)
LOC100507391 (3q29) / ARSG (17q24.2)TMCC1 (3q22.1) / ARSG (17q24.2)ARSG CEP112
ARSG TEX2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ARSG   24102
Cards
Entrez_Gene (NCBI)ARSG    arylsulfatase G
AliasesUSH4
GeneCards (Weizmann)ARSG
Ensembl hg19 (Hinxton)ENSG00000141337 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000141337 [Gene_View]  ENSG00000141337 [Sequence]  chr17:68259170-68422731 [Contig_View]  ARSG [Vega]
ICGC DataPortalENSG00000141337
TCGA cBioPortalARSG
AceView (NCBI)ARSG
Genatlas (Paris)ARSG
SOURCE (Princeton)ARSG
Genetics Home Reference (NIH)ARSG
Genomic and cartography
GoldenPath hg38 (UCSC)ARSG  -     chr17:68259170-68422731 +  17q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARSG  -     17q24.2   [Description]    (hg19-Feb_2009)
GoldenPathARSG - 17q24.2 [CytoView hg19]  ARSG - 17q24.2 [CytoView hg38]
ImmunoBaseENSG00000141337
Genome Data Viewer NCBIARSG [Mapview hg19]  
OMIM610008   618144   
Gene and transcription
Genbank (Entrez)AB023218 AK311327 AY358380 BC012375 BG700864
RefSeq transcript (Entrez)NM_001267727 NM_001352899 NM_001352900 NM_001352901 NM_001352902 NM_001352903 NM_001352904 NM_001352905 NM_001352906 NM_001352907 NM_001352909 NM_001352910 NM_014960
Consensus coding sequences : CCDS (NCBI)ARSG
Gene ExpressionARSG [ NCBI-GEO ]   ARSG [ EBI - ARRAY_EXPRESS ]   ARSG [ SEEK ]   ARSG [ MEM ]
Gene Expression Viewer (FireBrowse)ARSG [ Firebrowse - Broad ]
GenevisibleExpression of ARSG in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22901
GTEX Portal (Tissue expression)ARSG
Human Protein AtlasENSG00000141337-ARSG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96EG1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96EG1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96EG1
PhosPhoSitePlusQ96EG1
Domaine pattern : Prosite (Expaxy)SULFATASE_1 (PS00523)    SULFATASE_2 (PS00149)   
Domains : Interpro (EBI)Alkaline_phosphatase_core_sf    Sulfatase_CS    Sulfatase_N   
Domain families : Pfam (Sanger)Sulfatase (PF00884)   
Domain families : Pfam (NCBI)pfam00884   
Conserved Domain (NCBI)ARSG
SuperfamilyQ96EG1
AlphaFold pdb e-kbQ96EG1   
Human Protein Atlas [tissue]ENSG00000141337-ARSG [tissue]
HPRD13826
Protein Interaction databases
DIP (DOE-UCLA)Q96EG1
IntAct (EBI)Q96EG1
BioGRIDARSG
STRING (EMBL)ARSG
ZODIACARSG
Ontologies - Pathways
QuickGOQ96EG1
Ontology : AmiGOarylsulfatase activity  arylsulfatase activity  arylsulfatase activity  arylsulfatase activity  extracellular space  lysosome  endoplasmic reticulum  endoplasmic reticulum lumen  sulfur compound metabolic process  metal ion binding  
Ontology : EGO-EBIarylsulfatase activity  arylsulfatase activity  arylsulfatase activity  arylsulfatase activity  extracellular space  lysosome  endoplasmic reticulum  endoplasmic reticulum lumen  sulfur compound metabolic process  metal ion binding  
NDEx NetworkARSG
Atlas of Cancer Signalling NetworkARSG
Wikipedia pathwaysARSG
Orthology - Evolution
OrthoDB22901
GeneTree (enSembl)ENSG00000141337
Phylogenetic Trees/Animal Genes : TreeFamARSG
Homologs : HomoloGeneARSG
Homology/Alignments : Family Browser (UCSC)ARSG
Gene fusions - Rearrangements
Fusion : QuiverARSG
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARSG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARSG
dbVarARSG
ClinVarARSG
MonarchARSG
1000_GenomesARSG 
Exome Variant ServerARSG
GNOMAD BrowserENSG00000141337
Varsome BrowserARSG
ACMGARSG variants
VarityQ96EG1
Genomic Variants (DGV)ARSG [DGVbeta]
DECIPHERARSG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARSG 
Mutations
ICGC Data PortalARSG 
TCGA Data PortalARSG 
Broad Tumor PortalARSG
OASIS PortalARSG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARSG  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DARSG
Mutations and Diseases : HGMDARSG
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaARSG
DgiDB (Drug Gene Interaction Database)ARSG
DoCM (Curated mutations)ARSG
CIViC (Clinical Interpretations of Variants in Cancer)ARSG
Cancer3DARSG
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610008    618144   
Orphanet
DisGeNETARSG
MedgenARSG
Genetic Testing Registry ARSG
NextProtQ96EG1 [Medical]
GENETestsARSG
Target ValidationARSG
Huge Navigator ARSG [HugePedia]
ClinGenARSG
Clinical trials, drugs, therapy
MyCancerGenomeARSG
Protein Interactions : CTDARSG
Pharm GKB GenePA143485307
PharosQ96EG1
Clinical trialARSG
Miscellaneous
canSAR (ICR)ARSG
HarmonizomeARSG
DataMed IndexARSG
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXARSG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:42:41 CEST 2021

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