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ARSG (arylsulfatase G)

Identity

Alias_symbol (synonym)KIAA1001
Other alias-
HGNC (Hugo) ARSG
LocusID (NCBI) 22901
Atlas_Id 60535
Location 17q24.2  [Link to chromosome band 17q24]
Location_base_pair Starts at 68291495 and ends at 68420859 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ARSG (17q24.2) / ARSG (17q24.2)ARSG (17q24.2) / CEP112 (17q24.1)ARSG (17q24.2) / TEX2 (17q23.3)
LOC100507391 (3q29) / ARSG (17q24.2)TMCC1 (3q22.1) / ARSG (17q24.2)ARSG CEP112
ARSG TEX2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 3 ]
  t(3;17)(q22;q24) TMCC1/ARSG
t(17;17)(q23;q24) ARSG/TEX2
t(17;17)(q24;q24) ARSG/CEP112


External links

Nomenclature
HGNC (Hugo)ARSG   24102
Cards
Entrez_Gene (NCBI)ARSG  22901  arylsulfatase G
Aliases
GeneCards (Weizmann)ARSG
Ensembl hg19 (Hinxton)ENSG00000141337 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000141337 [Gene_View]  ENSG00000141337 [Sequence]  chr17:68291495-68420859 [Contig_View]  ARSG [Vega]
ICGC DataPortalENSG00000141337
TCGA cBioPortalARSG
AceView (NCBI)ARSG
Genatlas (Paris)ARSG
WikiGenes22901
SOURCE (Princeton)ARSG
Genetics Home Reference (NIH)ARSG
Genomic and cartography
GoldenPath hg38 (UCSC)ARSG  -     chr17:68291495-68420859 +  17q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARSG  -     17q24.2   [Description]    (hg19-Feb_2009)
EnsemblARSG - 17q24.2 [CytoView hg19]  ARSG - 17q24.2 [CytoView hg38]
Mapping of homologs : NCBIARSG [Mapview hg19]  ARSG [Mapview hg38]
OMIM610008   
Gene and transcription
Genbank (Entrez)AB023218 AK311327 AY358380 BC012375 BG700864
RefSeq transcript (Entrez)NM_001267727 NM_014960
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARSG
Cluster EST : UnigeneHs.437249 [ NCBI ]
CGAP (NCI)Hs.437249
Alternative Splicing GalleryENSG00000141337
Gene ExpressionARSG [ NCBI-GEO ]   ARSG [ EBI - ARRAY_EXPRESS ]   ARSG [ SEEK ]   ARSG [ MEM ]
Gene Expression Viewer (FireBrowse)ARSG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22901
GTEX Portal (Tissue expression)ARSG
Human Protein AtlasENSG00000141337-ARSG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96EG1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96EG1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96EG1
Splice isoforms : SwissVarQ96EG1
Catalytic activity : Enzyme3.1.6.- [ Enzyme-Expasy ]   3.1.6.-3.1.6.- [ IntEnz-EBI ]   3.1.6.- [ BRENDA ]   3.1.6.- [ KEGG ]   
PhosPhoSitePlusQ96EG1
Domaine pattern : Prosite (Expaxy)SULFATASE_1 (PS00523)    SULFATASE_2 (PS00149)   
Domains : Interpro (EBI)Alkaline_Pase-like_a/b/a    Alkaline_phosphatase_core    Sulfatase_CS    Sulfatase_N   
Domain families : Pfam (Sanger)Sulfatase (PF00884)   
Domain families : Pfam (NCBI)pfam00884   
Conserved Domain (NCBI)ARSG
DMDM Disease mutations22901
Blocks (Seattle)ARSG
SuperfamilyQ96EG1
Human Protein Atlas [tissue]ENSG00000141337-ARSG [tissue]
Peptide AtlasQ96EG1
HPRD13826
IPIIPI00402293   IPI00910119   
Protein Interaction databases
DIP (DOE-UCLA)Q96EG1
IntAct (EBI)Q96EG1
FunCoupENSG00000141337
BioGRIDARSG
STRING (EMBL)ARSG
ZODIACARSG
Ontologies - Pathways
QuickGOQ96EG1
Ontology : AmiGO###############################################################################################################################################################################################################################################################                      
Ontology : EGO-EBI###############################################################################################################################################################################################################################################################                      
NDEx NetworkARSG
Atlas of Cancer Signalling NetworkARSG
Wikipedia pathwaysARSG
Orthology - Evolution
OrthoDB22901
GeneTree (enSembl)ENSG00000141337
Phylogenetic Trees/Animal Genes : TreeFamARSG
HOVERGENQ96EG1
HOGENOMQ96EG1
Homologs : HomoloGeneARSG
Homology/Alignments : Family Browser (UCSC)ARSG
Gene fusions - Rearrangements
Fusion PortalARSG CEP112
Fusion PortalARSG TEX2
Fusion : QuiverARSG
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARSG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARSG
dbVarARSG
ClinVarARSG
1000_GenomesARSG 
Exome Variant ServerARSG
ExAC (Exome Aggregation Consortium)ENSG00000141337
GNOMAD BrowserENSG00000141337
Varsome BrowserARSG
Genetic variants : HAPMAP22901
Genomic Variants (DGV)ARSG [DGVbeta]
DECIPHERARSG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARSG 
Mutations
ICGC Data PortalARSG 
TCGA Data PortalARSG 
Broad Tumor PortalARSG
OASIS PortalARSG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARSG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARSG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Mendelian genes
BioMutasearch ARSG
DgiDB (Drug Gene Interaction Database)ARSG
DoCM (Curated mutations)ARSG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARSG (select a term)
intoGenARSG
Cancer3DARSG(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610008   
Orphanet
DisGeNETARSG
MedgenARSG
Genetic Testing Registry ARSG
NextProtQ96EG1 [Medical]
TSGene22901
GENETestsARSG
Target ValidationARSG
Huge Navigator ARSG [HugePedia]
snp3D : Map Gene to Disease22901
BioCentury BCIQARSG
ClinGenARSG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22901
Chemical/Pharm GKB GenePA143485307
Clinical trialARSG
Miscellaneous
canSAR (ICR)ARSG (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARSG
EVEXARSG
GoPubMedARSG
iHOPARSG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:36:05 CEST 2018

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