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ARSI (arylsulfatase family member I)

Identity

Alias_namesarylsulfatase I
arylsulfatase family, member I
Alias_symbol (synonym)FLJ16069
SPG66
Other aliasASI
HGNC (Hugo) ARSI
LocusID (NCBI) 340075
Atlas_Id 60537
Location 5q32  [Link to chromosome band 5q32]
Location_base_pair Starts at 150296339 and ends at 150302962 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARSI   32521
Cards
Entrez_Gene (NCBI)ARSI  340075  arylsulfatase family member I
AliasesASI; SPG66
GeneCards (Weizmann)ARSI
Ensembl hg19 (Hinxton)ENSG00000183876 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183876 [Gene_View]  chr5:150296339-150302962 [Contig_View]  ARSI [Vega]
ICGC DataPortalENSG00000183876
TCGA cBioPortalARSI
AceView (NCBI)ARSI
Genatlas (Paris)ARSI
WikiGenes340075
SOURCE (Princeton)ARSI
Genetics Home Reference (NIH)ARSI
Genomic and cartography
GoldenPath hg38 (UCSC)ARSI  -     chr5:150296339-150302962 -  5q32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARSI  -     5q32   [Description]    (hg19-Feb_2009)
EnsemblARSI - 5q32 [CytoView hg19]  ARSI - 5q32 [CytoView hg38]
Mapping of homologs : NCBIARSI [Mapview hg19]  ARSI [Mapview hg38]
OMIM610009   
Gene and transcription
Genbank (Entrez)AB448735 AK122641 AY875937 BC111002 BC129995
RefSeq transcript (Entrez)NM_001012301
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARSI
Cluster EST : UnigeneHs.591252 [ NCBI ]
CGAP (NCI)Hs.591252
Alternative Splicing GalleryENSG00000183876
Gene ExpressionARSI [ NCBI-GEO ]   ARSI [ EBI - ARRAY_EXPRESS ]   ARSI [ SEEK ]   ARSI [ MEM ]
Gene Expression Viewer (FireBrowse)ARSI [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340075
GTEX Portal (Tissue expression)ARSI
Human Protein AtlasENSG00000183876-ARSI [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5FYB1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5FYB1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5FYB1
Splice isoforms : SwissVarQ5FYB1
Catalytic activity : Enzyme3.1.6.- [ Enzyme-Expasy ]   3.1.6.-3.1.6.- [ IntEnz-EBI ]   3.1.6.- [ BRENDA ]   3.1.6.- [ KEGG ]   
PhosPhoSitePlusQ5FYB1
Domaine pattern : Prosite (Expaxy)SULFATASE_1 (PS00523)    SULFATASE_2 (PS00149)   
Domains : Interpro (EBI)Alkaline_Pase-like_a/b/a    Alkaline_phosphatase_core    Sulfatase_CS    Sulfatase_N   
Domain families : Pfam (Sanger)Sulfatase (PF00884)   
Domain families : Pfam (NCBI)pfam00884   
Conserved Domain (NCBI)ARSI
DMDM Disease mutations340075
Blocks (Seattle)ARSI
SuperfamilyQ5FYB1
Human Protein Atlas [tissue]ENSG00000183876-ARSI [tissue]
Peptide AtlasQ5FYB1
HPRD16510
IPIIPI00257076   IPI00915442   IPI00967848   
Protein Interaction databases
DIP (DOE-UCLA)Q5FYB1
IntAct (EBI)Q5FYB1
FunCoupENSG00000183876
BioGRIDARSI
STRING (EMBL)ARSI
ZODIACARSI
Ontologies - Pathways
QuickGOQ5FYB1
Ontology : AmiGOarylsulfatase activity  protein binding  extracellular region  endoplasmic reticulum lumen  glycosphingolipid metabolic process  post-translational protein modification  metal ion binding  
Ontology : EGO-EBIarylsulfatase activity  protein binding  extracellular region  endoplasmic reticulum lumen  glycosphingolipid metabolic process  post-translational protein modification  metal ion binding  
NDEx NetworkARSI
Atlas of Cancer Signalling NetworkARSI
Wikipedia pathwaysARSI
Orthology - Evolution
OrthoDB340075
GeneTree (enSembl)ENSG00000183876
Phylogenetic Trees/Animal Genes : TreeFamARSI
HOVERGENQ5FYB1
HOGENOMQ5FYB1
Homologs : HomoloGeneARSI
Homology/Alignments : Family Browser (UCSC)ARSI
Gene fusions - Rearrangements
Tumor Fusion PortalARSI
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARSI [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARSI
dbVarARSI
ClinVarARSI
1000_GenomesARSI 
Exome Variant ServerARSI
ExAC (Exome Aggregation Consortium)ENSG00000183876
GNOMAD BrowserENSG00000183876
Genetic variants : HAPMAP340075
Genomic Variants (DGV)ARSI [DGVbeta]
DECIPHERARSI [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARSI 
Mutations
ICGC Data PortalARSI 
TCGA Data PortalARSI 
Broad Tumor PortalARSI
OASIS PortalARSI [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARSI  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARSI
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARSI
DgiDB (Drug Gene Interaction Database)ARSI
DoCM (Curated mutations)ARSI (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARSI (select a term)
intoGenARSI
Cancer3DARSI(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610009   
Orphanet22834   
DisGeNETARSI
MedgenARSI
Genetic Testing Registry ARSI
NextProtQ5FYB1 [Medical]
TSGene340075
GENETestsARSI
Target ValidationARSI
Huge Navigator ARSI [HugePedia]
snp3D : Map Gene to Disease340075
BioCentury BCIQARSI
ClinGenARSI
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340075
Chemical/Pharm GKB GenePA143485309
Clinical trialARSI
Miscellaneous
canSAR (ICR)ARSI (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARSI
EVEXARSI
GoPubMedARSI
iHOPARSI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:19:19 CET 2017

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