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ARSJ (arylsulfatase family member J)

Identity

Alias_namesarylsulfatase J
arylsulfatase family, member J
Alias_symbol (synonym)FLJ23548
Other aliasASJ
HGNC (Hugo) ARSJ
LocusID (NCBI) 79642
Atlas_Id 60538
Location 4q26  [Link to chromosome band 4q26]
Location_base_pair Starts at 113900284 and ends at 113979722 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF703 (8p11.23) / ARSJ (4q26)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARSJ   26286
Cards
Entrez_Gene (NCBI)ARSJ  79642  arylsulfatase family member J
AliasesASJ
GeneCards (Weizmann)ARSJ
Ensembl hg19 (Hinxton)ENSG00000180801 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180801 [Gene_View]  chr4:113900284-113979722 [Contig_View]  ARSJ [Vega]
ICGC DataPortalENSG00000180801
TCGA cBioPortalARSJ
AceView (NCBI)ARSJ
Genatlas (Paris)ARSJ
WikiGenes79642
SOURCE (Princeton)ARSJ
Genetics Home Reference (NIH)ARSJ
Genomic and cartography
GoldenPath hg38 (UCSC)ARSJ  -     chr4:113900284-113979722 -  4q26   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARSJ  -     4q26   [Description]    (hg19-Feb_2009)
EnsemblARSJ - 4q26 [CytoView hg19]  ARSJ - 4q26 [CytoView hg38]
Mapping of homologs : NCBIARSJ [Mapview hg19]  ARSJ [Mapview hg38]
OMIM610010   
Gene and transcription
Genbank (Entrez)AI087279 AK027201 AK307532 AM049401 AY358647
RefSeq transcript (Entrez)NM_024590
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARSJ
Cluster EST : UnigeneHs.712042 [ NCBI ]
CGAP (NCI)Hs.712042
Alternative Splicing GalleryENSG00000180801
Gene ExpressionARSJ [ NCBI-GEO ]   ARSJ [ EBI - ARRAY_EXPRESS ]   ARSJ [ SEEK ]   ARSJ [ MEM ]
Gene Expression Viewer (FireBrowse)ARSJ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79642
GTEX Portal (Tissue expression)ARSJ
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5FYB0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5FYB0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5FYB0
Splice isoforms : SwissVarQ5FYB0
Catalytic activity : Enzyme3.1.6.- [ Enzyme-Expasy ]   3.1.6.-3.1.6.- [ IntEnz-EBI ]   3.1.6.- [ BRENDA ]   3.1.6.- [ KEGG ]   
PhosPhoSitePlusQ5FYB0
Domaine pattern : Prosite (Expaxy)SULFATASE_1 (PS00523)    SULFATASE_2 (PS00149)   
Domains : Interpro (EBI)Alkaline_Pase-like_a/b/a    Alkaline_phosphatase_core    Sulfatase_CS    Sulfatase_N   
Domain families : Pfam (Sanger)Sulfatase (PF00884)   
Domain families : Pfam (NCBI)pfam00884   
Conserved Domain (NCBI)ARSJ
DMDM Disease mutations79642
Blocks (Seattle)ARSJ
SuperfamilyQ5FYB0
Human Protein AtlasENSG00000180801
Peptide AtlasQ5FYB0
HPRD08034
IPIIPI00413865   IPI00966139   IPI00873853   IPI00002342   
Protein Interaction databases
DIP (DOE-UCLA)Q5FYB0
IntAct (EBI)Q5FYB0
FunCoupENSG00000180801
BioGRIDARSJ
STRING (EMBL)ARSJ
ZODIACARSJ
Ontologies - Pathways
QuickGOQ5FYB0
Ontology : AmiGOarylsulfatase activity  extracellular region  endoplasmic reticulum lumen  glycosphingolipid metabolic process  post-translational protein modification  metal ion binding  
Ontology : EGO-EBIarylsulfatase activity  extracellular region  endoplasmic reticulum lumen  glycosphingolipid metabolic process  post-translational protein modification  metal ion binding  
NDEx NetworkARSJ
Atlas of Cancer Signalling NetworkARSJ
Wikipedia pathwaysARSJ
Orthology - Evolution
OrthoDB79642
GeneTree (enSembl)ENSG00000180801
Phylogenetic Trees/Animal Genes : TreeFamARSJ
HOVERGENQ5FYB0
HOGENOMQ5FYB0
Homologs : HomoloGeneARSJ
Homology/Alignments : Family Browser (UCSC)ARSJ
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARSJ [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARSJ
dbVarARSJ
ClinVarARSJ
1000_GenomesARSJ 
Exome Variant ServerARSJ
ExAC (Exome Aggregation Consortium)ARSJ (select the gene name)
Genetic variants : HAPMAP79642
Genomic Variants (DGV)ARSJ [DGVbeta]
DECIPHERARSJ [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARSJ 
Mutations
ICGC Data PortalARSJ 
TCGA Data PortalARSJ 
Broad Tumor PortalARSJ
OASIS PortalARSJ [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARSJ  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARSJ
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARSJ
DgiDB (Drug Gene Interaction Database)ARSJ
DoCM (Curated mutations)ARSJ (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARSJ (select a term)
intoGenARSJ
Cancer3DARSJ(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610010   
Orphanet
MedgenARSJ
Genetic Testing Registry ARSJ
NextProtQ5FYB0 [Medical]
TSGene79642
GENETestsARSJ
Target ValidationARSJ
Huge Navigator ARSJ [HugePedia]
snp3D : Map Gene to Disease79642
BioCentury BCIQARSJ
ClinGenARSJ
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79642
Chemical/Pharm GKB GenePA143485310
Clinical trialARSJ
Miscellaneous
canSAR (ICR)ARSJ (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARSJ
EVEXARSJ
GoPubMedARSJ
iHOPARSJ
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:49 CEST 2017

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