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ARSJ (arylsulfatase family member J)

Identity

Alias (NCBI)ASJ
HGNC (Hugo) ARSJ
HGNC Alias symbFLJ23548
HGNC Previous namearylsulfatase J
 arylsulfatase family, member J
LocusID (NCBI) 79642
Atlas_Id 60538
Location 4q26  [Link to chromosome band 4q26]
Location_base_pair Starts at 113900284 and ends at 113979647 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF703 (8p11.23) / ARSJ (4q26)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ARSJ   26286
Cards
Entrez_Gene (NCBI)ARSJ    arylsulfatase family member J
AliasesASJ
GeneCards (Weizmann)ARSJ
Ensembl hg19 (Hinxton)ENSG00000180801 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180801 [Gene_View]  ENSG00000180801 [Sequence]  chr4:113900284-113979647 [Contig_View]  ARSJ [Vega]
ICGC DataPortalENSG00000180801
TCGA cBioPortalARSJ
AceView (NCBI)ARSJ
Genatlas (Paris)ARSJ
SOURCE (Princeton)ARSJ
Genetics Home Reference (NIH)ARSJ
Genomic and cartography
GoldenPath hg38 (UCSC)ARSJ  -     chr4:113900284-113979647 -  4q26   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARSJ  -     4q26   [Description]    (hg19-Feb_2009)
GoldenPathARSJ - 4q26 [CytoView hg19]  ARSJ - 4q26 [CytoView hg38]
ImmunoBaseENSG00000180801
Genome Data Viewer NCBIARSJ [Mapview hg19]  
OMIM610010   
Gene and transcription
Genbank (Entrez)AI087279 AK027201 AK307532 AM049401 AY358647
RefSeq transcript (Entrez)NM_001354210 NM_001354211 NM_024590
Consensus coding sequences : CCDS (NCBI)ARSJ
Gene ExpressionARSJ [ NCBI-GEO ]   ARSJ [ EBI - ARRAY_EXPRESS ]   ARSJ [ SEEK ]   ARSJ [ MEM ]
Gene Expression Viewer (FireBrowse)ARSJ [ Firebrowse - Broad ]
GenevisibleExpression of ARSJ in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79642
GTEX Portal (Tissue expression)ARSJ
Human Protein AtlasENSG00000180801-ARSJ [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5FYB0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5FYB0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5FYB0
Catalytic activity : Enzyme3.1.6.- [ Enzyme-Expasy ]   3.1.6.-3.1.6.- [ IntEnz-EBI ]   3.1.6.- [ BRENDA ]   3.1.6.- [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ5FYB0
Domaine pattern : Prosite (Expaxy)SULFATASE_1 (PS00523)    SULFATASE_2 (PS00149)   
Domains : Interpro (EBI)Alkaline_phosphatase_core_sf    Sulfatase_CS    Sulfatase_N   
Domain families : Pfam (Sanger)Sulfatase (PF00884)   
Domain families : Pfam (NCBI)pfam00884   
Conserved Domain (NCBI)ARSJ
SuperfamilyQ5FYB0
AlphaFold pdb e-kbQ5FYB0   
Human Protein Atlas [tissue]ENSG00000180801-ARSJ [tissue]
HPRD08034
Protein Interaction databases
DIP (DOE-UCLA)Q5FYB0
IntAct (EBI)Q5FYB0
BioGRIDARSJ
STRING (EMBL)ARSJ
ZODIACARSJ
Ontologies - Pathways
QuickGOQ5FYB0
Ontology : AmiGOarylsulfatase activity  extracellular region  endoplasmic reticulum lumen  actin cytoskeleton  metal ion binding  
Ontology : EGO-EBIarylsulfatase activity  extracellular region  endoplasmic reticulum lumen  actin cytoskeleton  metal ion binding  
NDEx NetworkARSJ
Atlas of Cancer Signalling NetworkARSJ
Wikipedia pathwaysARSJ
Orthology - Evolution
OrthoDB79642
GeneTree (enSembl)ENSG00000180801
Phylogenetic Trees/Animal Genes : TreeFamARSJ
Homologs : HomoloGeneARSJ
Homology/Alignments : Family Browser (UCSC)ARSJ
Gene fusions - Rearrangements
Fusion : QuiverARSJ
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARSJ [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARSJ
dbVarARSJ
ClinVarARSJ
MonarchARSJ
1000_GenomesARSJ 
Exome Variant ServerARSJ
GNOMAD BrowserENSG00000180801
Varsome BrowserARSJ
ACMGARSJ variants
VarityQ5FYB0
Genomic Variants (DGV)ARSJ [DGVbeta]
DECIPHERARSJ [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARSJ 
Mutations
ICGC Data PortalARSJ 
TCGA Data PortalARSJ 
Broad Tumor PortalARSJ
OASIS PortalARSJ [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARSJ  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DARSJ
Mutations and Diseases : HGMDARSJ
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaARSJ
DgiDB (Drug Gene Interaction Database)ARSJ
DoCM (Curated mutations)ARSJ
CIViC (Clinical Interpretations of Variants in Cancer)ARSJ
Cancer3DARSJ
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610010   
Orphanet
DisGeNETARSJ
MedgenARSJ
Genetic Testing Registry ARSJ
NextProtQ5FYB0 [Medical]
GENETestsARSJ
Target ValidationARSJ
Huge Navigator ARSJ [HugePedia]
ClinGenARSJ
Clinical trials, drugs, therapy
MyCancerGenomeARSJ
Protein Interactions : CTDARSJ
Pharm GKB GenePA143485310
PharosQ5FYB0
Clinical trialARSJ
Miscellaneous
canSAR (ICR)ARSJ
HarmonizomeARSJ
DataMed IndexARSJ
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXARSJ
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:42:41 CEST 2021

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