Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ARSK (arylsulfatase family member K)

Identity

Alias (NCBI)TSULF
HGNC (Hugo) ARSK
HGNC Alias symbDKFZp313G1735
TSULF
HGNC Previous namearylsulfatase K
 arylsulfatase family, member K
LocusID (NCBI) 153642
Atlas_Id 60539
Location 5q15  [Link to chromosome band 5q15]
Location_base_pair Starts at 95555101 and ends at 95605102 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ARSK   25239
Cards
Entrez_Gene (NCBI)ARSK    arylsulfatase family member K
AliasesTSULF
GeneCards (Weizmann)ARSK
Ensembl hg19 (Hinxton)ENSG00000164291 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164291 [Gene_View]  ENSG00000164291 [Sequence]  chr5:95555101-95605102 [Contig_View]  ARSK [Vega]
ICGC DataPortalENSG00000164291
TCGA cBioPortalARSK
AceView (NCBI)ARSK
Genatlas (Paris)ARSK
SOURCE (Princeton)ARSK
Genetics Home Reference (NIH)ARSK
Genomic and cartography
GoldenPath hg38 (UCSC)ARSK  -     chr5:95555101-95605102 +  5q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARSK  -     5q15   [Description]    (hg19-Feb_2009)
GoldenPathARSK - 5q15 [CytoView hg19]  ARSK - 5q15 [CytoView hg38]
ImmunoBaseENSG00000164291
Genome Data Viewer NCBIARSK [Mapview hg19]  
OMIM610011   
Gene and transcription
Genbank (Entrez)AK303855 AK316253 AL832711 AY358596 AY875939
RefSeq transcript (Entrez)NM_198150
Consensus coding sequences : CCDS (NCBI)ARSK
Gene ExpressionARSK [ NCBI-GEO ]   ARSK [ EBI - ARRAY_EXPRESS ]   ARSK [ SEEK ]   ARSK [ MEM ]
Gene Expression Viewer (FireBrowse)ARSK [ Firebrowse - Broad ]
GenevisibleExpression of ARSK in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)153642
GTEX Portal (Tissue expression)ARSK
Human Protein AtlasENSG00000164291-ARSK [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UWY0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UWY0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UWY0
Catalytic activity : Enzyme3.1.6.- [ Enzyme-Expasy ]   3.1.6.-3.1.6.- [ IntEnz-EBI ]   3.1.6.- [ BRENDA ]   3.1.6.- [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ6UWY0
Domains : Interpro (EBI)Alkaline_phosphatase_core_sf    Sulfatase_N   
Domain families : Pfam (Sanger)Sulfatase (PF00884)   
Domain families : Pfam (NCBI)pfam00884   
Conserved Domain (NCBI)ARSK
SuperfamilyQ6UWY0
AlphaFold pdb e-kbQ6UWY0   
Human Protein Atlas [tissue]ENSG00000164291-ARSK [tissue]
HPRD13183
Protein Interaction databases
DIP (DOE-UCLA)Q6UWY0
IntAct (EBI)Q6UWY0
BioGRIDARSK
STRING (EMBL)ARSK
ZODIACARSK
Ontologies - Pathways
QuickGOQ6UWY0
Ontology : AmiGOarylsulfatase activity  extracellular region  endoplasmic reticulum lumen  metal ion binding  
Ontology : EGO-EBIarylsulfatase activity  extracellular region  endoplasmic reticulum lumen  metal ion binding  
NDEx NetworkARSK
Atlas of Cancer Signalling NetworkARSK
Wikipedia pathwaysARSK
Orthology - Evolution
OrthoDB153642
GeneTree (enSembl)ENSG00000164291
Phylogenetic Trees/Animal Genes : TreeFamARSK
Homologs : HomoloGeneARSK
Homology/Alignments : Family Browser (UCSC)ARSK
Gene fusions - Rearrangements
Fusion : QuiverARSK
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARSK [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARSK
dbVarARSK
ClinVarARSK
MonarchARSK
1000_GenomesARSK 
Exome Variant ServerARSK
GNOMAD BrowserENSG00000164291
Varsome BrowserARSK
ACMGARSK variants
VarityQ6UWY0
Genomic Variants (DGV)ARSK [DGVbeta]
DECIPHERARSK [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARSK 
Mutations
ICGC Data PortalARSK 
TCGA Data PortalARSK 
Broad Tumor PortalARSK
OASIS PortalARSK [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARSK  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DARSK
Mutations and Diseases : HGMDARSK
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaARSK
DgiDB (Drug Gene Interaction Database)ARSK
DoCM (Curated mutations)ARSK
CIViC (Clinical Interpretations of Variants in Cancer)ARSK
Cancer3DARSK
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610011   
Orphanet
DisGeNETARSK
MedgenARSK
Genetic Testing Registry ARSK
NextProtQ6UWY0 [Medical]
GENETestsARSK
Target ValidationARSK
Huge Navigator ARSK [HugePedia]
ClinGenARSK
Clinical trials, drugs, therapy
MyCancerGenomeARSK
Protein Interactions : CTDARSK
Pharm GKB GenePA143485311
PharosQ6UWY0
Clinical trialARSK
Miscellaneous
canSAR (ICR)ARSK
HarmonizomeARSK
DataMed IndexARSK
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXARSK
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:42:42 CEST 2021

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