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ARSK (arylsulfatase family member K)

Identity

Alias_namesarylsulfatase K
arylsulfatase family, member K
Alias_symbol (synonym)DKFZp313G1735
TSULF
Other alias
HGNC (Hugo) ARSK
LocusID (NCBI) 153642
Atlas_Id 60539
Location 5q15  [Link to chromosome band 5q15]
Location_base_pair Starts at 95555121 and ends at 95605102 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARSK   25239
Cards
Entrez_Gene (NCBI)ARSK  153642  arylsulfatase family member K
AliasesTSULF
GeneCards (Weizmann)ARSK
Ensembl hg19 (Hinxton)ENSG00000164291 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164291 [Gene_View]  chr5:95555121-95605102 [Contig_View]  ARSK [Vega]
ICGC DataPortalENSG00000164291
TCGA cBioPortalARSK
AceView (NCBI)ARSK
Genatlas (Paris)ARSK
WikiGenes153642
SOURCE (Princeton)ARSK
Genetics Home Reference (NIH)ARSK
Genomic and cartography
GoldenPath hg38 (UCSC)ARSK  -     chr5:95555121-95605102 +  5q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARSK  -     5q15   [Description]    (hg19-Feb_2009)
EnsemblARSK - 5q15 [CytoView hg19]  ARSK - 5q15 [CytoView hg38]
Mapping of homologs : NCBIARSK [Mapview hg19]  ARSK [Mapview hg38]
OMIM610011   
Gene and transcription
Genbank (Entrez)AK303855 AK316253 AL832711 AY358596 AY875939
RefSeq transcript (Entrez)NM_198150
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARSK
Cluster EST : UnigeneHs.585051 [ NCBI ]
CGAP (NCI)Hs.585051
Alternative Splicing GalleryENSG00000164291
Gene ExpressionARSK [ NCBI-GEO ]   ARSK [ EBI - ARRAY_EXPRESS ]   ARSK [ SEEK ]   ARSK [ MEM ]
Gene Expression Viewer (FireBrowse)ARSK [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)153642
GTEX Portal (Tissue expression)ARSK
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UWY0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UWY0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UWY0
Splice isoforms : SwissVarQ6UWY0
Catalytic activity : Enzyme3.1.6.- [ Enzyme-Expasy ]   3.1.6.-3.1.6.- [ IntEnz-EBI ]   3.1.6.- [ BRENDA ]   3.1.6.- [ KEGG ]   
PhosPhoSitePlusQ6UWY0
Domains : Interpro (EBI)Alkaline_Pase-like_a/b/a    Alkaline_phosphatase_core    Sulfatase_N   
Domain families : Pfam (Sanger)Sulfatase (PF00884)   
Domain families : Pfam (NCBI)pfam00884   
Conserved Domain (NCBI)ARSK
DMDM Disease mutations153642
Blocks (Seattle)ARSK
SuperfamilyQ6UWY0
Human Protein AtlasENSG00000164291
Peptide AtlasQ6UWY0
HPRD13183
IPIIPI00296524   IPI00965388   IPI00965705   IPI00967230   IPI00964782   
Protein Interaction databases
DIP (DOE-UCLA)Q6UWY0
IntAct (EBI)Q6UWY0
FunCoupENSG00000164291
BioGRIDARSK
STRING (EMBL)ARSK
ZODIACARSK
Ontologies - Pathways
QuickGOQ6UWY0
Ontology : AmiGOarylsulfatase activity  extracellular region  endoplasmic reticulum lumen  glycosphingolipid metabolic process  post-translational protein modification  metal ion binding  
Ontology : EGO-EBIarylsulfatase activity  extracellular region  endoplasmic reticulum lumen  glycosphingolipid metabolic process  post-translational protein modification  metal ion binding  
NDEx NetworkARSK
Atlas of Cancer Signalling NetworkARSK
Wikipedia pathwaysARSK
Orthology - Evolution
OrthoDB153642
GeneTree (enSembl)ENSG00000164291
Phylogenetic Trees/Animal Genes : TreeFamARSK
HOVERGENQ6UWY0
HOGENOMQ6UWY0
Homologs : HomoloGeneARSK
Homology/Alignments : Family Browser (UCSC)ARSK
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerARSK [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ARSK
dbVarARSK
ClinVarARSK
1000_GenomesARSK 
Exome Variant ServerARSK
ExAC (Exome Aggregation Consortium)ARSK (select the gene name)
Genetic variants : HAPMAP153642
Genomic Variants (DGV)ARSK [DGVbeta]
DECIPHERARSK [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisARSK 
Mutations
ICGC Data PortalARSK 
TCGA Data PortalARSK 
Broad Tumor PortalARSK
OASIS PortalARSK [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICARSK  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDARSK
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ARSK
DgiDB (Drug Gene Interaction Database)ARSK
DoCM (Curated mutations)ARSK (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ARSK (select a term)
intoGenARSK
Cancer3DARSK(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610011   
Orphanet
MedgenARSK
Genetic Testing Registry ARSK
NextProtQ6UWY0 [Medical]
TSGene153642
GENETestsARSK
Target ValidationARSK
Huge Navigator ARSK [HugePedia]
snp3D : Map Gene to Disease153642
BioCentury BCIQARSK
ClinGenARSK
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD153642
Chemical/Pharm GKB GenePA143485311
Clinical trialARSK
Miscellaneous
canSAR (ICR)ARSK (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineARSK
EVEXARSK
GoPubMedARSK
iHOPARSK
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:38:54 CEST 2017

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