Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ART3 (ADP-ribosyltransferase 3)

Identity

Other aliasARTC3
HGNC (Hugo) ART3
LocusID (NCBI) 419
Atlas_Id 60540
Location 4q21.1  [Link to chromosome band 4q21]
Location_base_pair Starts at 76074695 and ends at 76112802 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ART3 (4q21.1) / GLUL (1q25.3)ART3 (4q21.1) / KCTD8 (4p13)ART3 (4q21.1) / NUP54 (4q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ART3   725
Cards
Entrez_Gene (NCBI)ART3  419  ADP-ribosyltransferase 3
AliasesARTC3
GeneCards (Weizmann)ART3
Ensembl hg19 (Hinxton)ENSG00000156219 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156219 [Gene_View]  chr4:76074695-76112802 [Contig_View]  ART3 [Vega]
ICGC DataPortalENSG00000156219
TCGA cBioPortalART3
AceView (NCBI)ART3
Genatlas (Paris)ART3
WikiGenes419
SOURCE (Princeton)ART3
Genetics Home Reference (NIH)ART3
Genomic and cartography
GoldenPath hg38 (UCSC)ART3  -     chr4:76074695-76112802 +  4q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ART3  -     4q21.1   [Description]    (hg19-Feb_2009)
EnsemblART3 - 4q21.1 [CytoView hg19]  ART3 - 4q21.1 [CytoView hg38]
Mapping of homologs : NCBIART3 [Mapview hg19]  ART3 [Mapview hg38]
OMIM603086   
Gene and transcription
Genbank (Entrez)AK129914 AK225860 AK295305 AK308810 AY543655
RefSeq transcript (Entrez)NM_001130016 NM_001130017 NM_001179
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ART3
Cluster EST : UnigeneHs.731997 [ NCBI ]
CGAP (NCI)Hs.731997
Alternative Splicing GalleryENSG00000156219
Gene ExpressionART3 [ NCBI-GEO ]   ART3 [ EBI - ARRAY_EXPRESS ]   ART3 [ SEEK ]   ART3 [ MEM ]
Gene Expression Viewer (FireBrowse)ART3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)419
GTEX Portal (Tissue expression)ART3
Human Protein AtlasENSG00000156219-ART3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13508   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13508  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13508
Splice isoforms : SwissVarQ13508
Catalytic activity : Enzyme2.4.2.31 [ Enzyme-Expasy ]   2.4.2.312.4.2.31 [ IntEnz-EBI ]   2.4.2.31 [ BRENDA ]   2.4.2.31 [ KEGG ]   
PhosPhoSitePlusQ13508
Domaine pattern : Prosite (Expaxy)ART (PS01291)   
Domains : Interpro (EBI)ART   
Domain families : Pfam (Sanger)ART (PF01129)   
Domain families : Pfam (NCBI)pfam01129   
Conserved Domain (NCBI)ART3
DMDM Disease mutations419
Blocks (Seattle)ART3
SuperfamilyQ13508
Human Protein Atlas [tissue]ENSG00000156219-ART3 [tissue]
Peptide AtlasQ13508
HPRD04363
IPIIPI00013682   IPI00220292   IPI00220293   IPI00909926   IPI00966812   IPI00966595   IPI00966346   IPI00967075   IPI00965470   IPI00967305   
Protein Interaction databases
DIP (DOE-UCLA)Q13508
IntAct (EBI)Q13508
FunCoupENSG00000156219
BioGRIDART3
STRING (EMBL)ART3
ZODIACART3
Ontologies - Pathways
QuickGOQ13508
Ontology : AmiGONAD+ ADP-ribosyltransferase activity  NAD(P)+-protein-arginine ADP-ribosyltransferase activity  extracellular region  plasma membrane  integral component of plasma membrane  protein ADP-ribosylation  C-terminal protein lipidation  anchored component of membrane  extracellular exosome  
Ontology : EGO-EBINAD+ ADP-ribosyltransferase activity  NAD(P)+-protein-arginine ADP-ribosyltransferase activity  extracellular region  plasma membrane  integral component of plasma membrane  protein ADP-ribosylation  C-terminal protein lipidation  anchored component of membrane  extracellular exosome  
NDEx NetworkART3
Atlas of Cancer Signalling NetworkART3
Wikipedia pathwaysART3
Orthology - Evolution
OrthoDB419
GeneTree (enSembl)ENSG00000156219
Phylogenetic Trees/Animal Genes : TreeFamART3
HOVERGENQ13508
HOGENOMQ13508
Homologs : HomoloGeneART3
Homology/Alignments : Family Browser (UCSC)ART3
Gene fusions - Rearrangements
Tumor Fusion PortalART3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerART3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ART3
dbVarART3
ClinVarART3
1000_GenomesART3 
Exome Variant ServerART3
ExAC (Exome Aggregation Consortium)ENSG00000156219
GNOMAD BrowserENSG00000156219
Genetic variants : HAPMAP419
Genomic Variants (DGV)ART3 [DGVbeta]
DECIPHERART3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisART3 
Mutations
ICGC Data PortalART3 
TCGA Data PortalART3 
Broad Tumor PortalART3
OASIS PortalART3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICART3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDART3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ART3
DgiDB (Drug Gene Interaction Database)ART3
DoCM (Curated mutations)ART3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ART3 (select a term)
intoGenART3
Cancer3DART3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603086   
Orphanet
DisGeNETART3
MedgenART3
Genetic Testing Registry ART3
NextProtQ13508 [Medical]
TSGene419
GENETestsART3
Target ValidationART3
Huge Navigator ART3 [HugePedia]
snp3D : Map Gene to Disease419
BioCentury BCIQART3
ClinGenART3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD419
Chemical/Pharm GKB GenePA25016
Clinical trialART3
Miscellaneous
canSAR (ICR)ART3 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineART3
EVEXART3
GoPubMedART3
iHOPART3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:09:37 CET 2017

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