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AS-PTPRE (lncRNA antisense to PTPRE protein-coding gene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105378553
Atlas_Id 78339
Location 10q26.2  [Link to chromosome band 10q26]
Location_base_pair Starts at 128057732 and ends at 128062425 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)AS-PTPRE  105378553  lncRNA antisense to PTPRE protein-coding gene
Aliases
GeneCards (Weizmann)AS-PTPRE
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:128057732-128062425 [Contig_View]  AS-PTPRE [Vega]
TCGA cBioPortalAS-PTPRE
AceView (NCBI)AS-PTPRE
Genatlas (Paris)AS-PTPRE
WikiGenes105378553
SOURCE (Princeton)AS-PTPRE
Genetics Home Reference (NIH)AS-PTPRE
Genomic and cartography
GoldenPath hg38 (UCSC)AS-PTPRE  -     chr10:128057732-128062425 -  10q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AS-PTPRE  -     10q26.2   [Description]    (hg19-Feb_2009)
EnsemblAS-PTPRE - 10q26.2 [CytoView hg19]  AS-PTPRE - 10q26.2 [CytoView hg38]
Mapping of homologs : NCBIAS-PTPRE [Mapview hg19]  AS-PTPRE [Mapview hg38]
Gene and transcription
Genbank (Entrez)KR186191 KR186192 KR186193 KR186194 KR186195
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AS-PTPRE
Gene ExpressionAS-PTPRE [ NCBI-GEO ]   AS-PTPRE [ EBI - ARRAY_EXPRESS ]   AS-PTPRE [ SEEK ]   AS-PTPRE [ MEM ]
Gene Expression Viewer (FireBrowse)AS-PTPRE [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378553
GTEX Portal (Tissue expression)AS-PTPRE
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AS-PTPRE
DMDM Disease mutations105378553
Blocks (Seattle)AS-PTPRE
Protein Interaction databases
BioGRIDAS-PTPRE
STRING (EMBL)AS-PTPRE
ZODIACAS-PTPRE
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105378553
BioCentury BCIQAS-PTPRE
ClinGenAS-PTPRE
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378553
Clinical trialAS-PTPRE
Miscellaneous
canSAR (ICR)AS-PTPRE (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineAS-PTPRE
EVEXAS-PTPRE
GoPubMedAS-PTPRE
iHOPAS-PTPRE
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:01:07 CEST 2017

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