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ASAH2B (N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B)

Identity

Alias_namesASAH2C
N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2C
N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B
Alias_symbol (synonym)bA449O16.3
ASAH2L
bA98I6.3
Other alias
HGNC (Hugo) ASAH2B
LocusID (NCBI) 653308
Atlas_Id 60544
Location 10q11.23  [Link to chromosome band 10q11]
Location_base_pair Starts at 52499688 and ends at 52514569 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASAH2B   23456
Cards
Entrez_Gene (NCBI)ASAH2B  653308  N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B
AliasesASAH2C; ASAH2L; bA449O16.3; bA98I6.3
GeneCards (Weizmann)ASAH2B
Ensembl hg19 (Hinxton)ENSG00000204147 [Gene_View]  chr10:52499688-52514569 [Contig_View]  ASAH2B [Vega]
Ensembl hg38 (Hinxton)ENSG00000204147 [Gene_View]  chr10:52499688-52514569 [Contig_View]  ASAH2B [Vega]
ICGC DataPortalENSG00000204147
TCGA cBioPortalASAH2B
AceView (NCBI)ASAH2B
Genatlas (Paris)ASAH2B
WikiGenes653308
SOURCE (Princeton)ASAH2B
Genetics Home Reference (NIH)ASAH2B
Genomic and cartography
GoldenPath hg19 (UCSC)ASAH2B  -     chr10:52499688-52514569 +  10q11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ASAH2B  -     10q11.23   [Description]    (hg38-Dec_2013)
EnsemblASAH2B - 10q11.23 [CytoView hg19]  ASAH2B - 10q11.23 [CytoView hg38]
Mapping of homologs : NCBIASAH2B [Mapview hg19]  ASAH2B [Mapview hg38]
OMIM610987   
Gene and transcription
Genbank (Entrez)AK294369 BG773189 DC329838
RefSeq transcript (Entrez)NM_001079516
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)ASAH2B
Cluster EST : UnigeneHs.710005 [ NCBI ]
CGAP (NCI)Hs.710005
Alternative Splicing GalleryENSG00000204147
Gene ExpressionASAH2B [ NCBI-GEO ]   ASAH2B [ EBI - ARRAY_EXPRESS ]   ASAH2B [ SEEK ]   ASAH2B [ MEM ]
Gene Expression Viewer (FireBrowse)ASAH2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653308
GTEX Portal (Tissue expression)ASAH2B
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C7U1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C7U1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C7U1
Splice isoforms : SwissVarP0C7U1
PhosPhoSitePlusP0C7U1
Domains : Interpro (EBI)Ceramidase_alk   
Domain families : Pfam (Sanger)Ceramidase_alk (PF04734)   
Domain families : Pfam (NCBI)pfam04734   
Conserved Domain (NCBI)ASAH2B
DMDM Disease mutations653308
Blocks (Seattle)ASAH2B
SuperfamilyP0C7U1
Human Protein AtlasENSG00000204147
Peptide AtlasP0C7U1
IPIIPI00513980   IPI00784685   
Protein Interaction databases
DIP (DOE-UCLA)P0C7U1
IntAct (EBI)P0C7U1
FunCoupENSG00000204147
BioGRIDASAH2B
STRING (EMBL)ASAH2B
ZODIACASAH2B
Ontologies - Pathways
QuickGOP0C7U1
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkASAH2B
Atlas of Cancer Signalling NetworkASAH2B
Wikipedia pathwaysASAH2B
Orthology - Evolution
OrthoDB653308
GeneTree (enSembl)ENSG00000204147
Phylogenetic Trees/Animal Genes : TreeFamASAH2B
HOVERGENP0C7U1
HOGENOMP0C7U1
Homologs : HomoloGeneASAH2B
Homology/Alignments : Family Browser (UCSC)ASAH2B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerASAH2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ASAH2B
dbVarASAH2B
ClinVarASAH2B
1000_GenomesASAH2B 
Exome Variant ServerASAH2B
ExAC (Exome Aggregation Consortium)ASAH2B (select the gene name)
Genetic variants : HAPMAP653308
Genomic Variants (DGV)ASAH2B [DGVbeta]
DECIPHER (Syndromes)10:52499688-52514569  ENSG00000204147
CONAN: Copy Number AnalysisASAH2B 
Mutations
ICGC Data PortalASAH2B 
TCGA Data PortalASAH2B 
Broad Tumor PortalASAH2B
OASIS PortalASAH2B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICASAH2B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDASAH2B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ASAH2B
DgiDB (Drug Gene Interaction Database)ASAH2B
DoCM (Curated mutations)ASAH2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ASAH2B (select a term)
intoGenASAH2B
Cancer3DASAH2B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610987   
Orphanet
MedgenASAH2B
Genetic Testing Registry ASAH2B
NextProtP0C7U1 [Medical]
TSGene653308
GENETestsASAH2B
Huge Navigator ASAH2B [HugePedia]
snp3D : Map Gene to Disease653308
BioCentury BCIQASAH2B
ClinGenASAH2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653308
Chemical/Pharm GKB GenePA134977109
Clinical trialASAH2B
Miscellaneous
canSAR (ICR)ASAH2B (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASAH2B
EVEXASAH2B
GoPubMedASAH2B
iHOPASAH2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:55:07 CET 2017

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