Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ASAP1-IT1 (ASAP1 intronic transcript 1)

Identity

Alias_namesDDEF1IT1
DDEF1 intronic transcript 1
DDEF1 intronic transcript 1 (non-protein coding)
ASAP1 intronic transcript 1 (non-protein coding)
Alias_symbol (synonym)HSPC054
NCRNA00050
ASAP1IT
ASAP1-IT
Other aliasASAP1IT1
HGNC (Hugo) ASAP1-IT1
LocusID (NCBI) 29065
Atlas_Id 60545
Location 8q24.21  [Link to chromosome band 8q24]
Location_base_pair Starts at 130295355 and ends at 130296533 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASAP1-IT1   24998
Cards
Entrez_Gene (NCBI)ASAP1-IT1  29065  ASAP1 intronic transcript 1
AliasesASAP1-IT; ASAP1IT; ASAP1IT1; DDEF1IT1; 
HSPC054; NCRNA00050
GeneCards (Weizmann)ASAP1-IT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:130295355-130296533 [Contig_View]  ASAP1-IT1 [Vega]
TCGA cBioPortalASAP1-IT1
AceView (NCBI)ASAP1-IT1
Genatlas (Paris)ASAP1-IT1
WikiGenes29065
SOURCE (Princeton)ASAP1-IT1
Genetics Home Reference (NIH)ASAP1-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)ASAP1-IT1  -     chr8:130295355-130296533 -  8q24.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ASAP1-IT1  -     8q24.21   [Description]    (hg19-Feb_2009)
EnsemblASAP1-IT1 - 8q24.21 [CytoView hg19]  ASAP1-IT1 - 8q24.21 [CytoView hg38]
Mapping of homologs : NCBIASAP1-IT1 [Mapview hg19]  ASAP1-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF161539
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ASAP1-IT1
Cluster EST : UnigeneHs.639318 [ NCBI ]
CGAP (NCI)Hs.639318
Gene ExpressionASAP1-IT1 [ NCBI-GEO ]   ASAP1-IT1 [ EBI - ARRAY_EXPRESS ]   ASAP1-IT1 [ SEEK ]   ASAP1-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)ASAP1-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)29065
GTEX Portal (Tissue expression)ASAP1-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ASAP1-IT1
DMDM Disease mutations29065
Blocks (Seattle)ASAP1-IT1
IPIIPI00023043   
Protein Interaction databases
BioGRIDASAP1-IT1
STRING (EMBL)ASAP1-IT1
ZODIACASAP1-IT1
Ontologies - Pathways
Huge Navigator ASAP1-IT1 [HugePedia]
snp3D : Map Gene to Disease29065
BioCentury BCIQASAP1-IT1
ClinGenASAP1-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29065
Chemical/Pharm GKB GenePA165585422
Clinical trialASAP1-IT1
Miscellaneous
canSAR (ICR)ASAP1-IT1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASAP1-IT1
EVEXASAP1-IT1
GoPubMedASAP1-IT1
iHOPASAP1-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:50 CEST 2017

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