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ASB11 (ankyrin repeat and SOCS box containing 11)

Identity

Alias_namesankyrin repeat and SOCS box-containing 11
ankyrin repeat and SOCS box containing 11
ankyrin repeat and SOCS box containing 11, E3 ubiquitin protein ligase
Alias_symbol (synonym)DKFZp779E2460
Other alias-
HGNC (Hugo) ASB11
LocusID (NCBI) 140456
Atlas_Id 60550
Location Xp22.2  [Link to chromosome band Xp22]
Location_base_pair Starts at 15281709 and ends at 15314559 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASB11   17186
Cards
Entrez_Gene (NCBI)ASB11  140456  ankyrin repeat and SOCS box containing 11
Aliases
GeneCards (Weizmann)ASB11
Ensembl hg19 (Hinxton)ENSG00000165192 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165192 [Gene_View]  chrX:15281709-15314559 [Contig_View]  ASB11 [Vega]
ICGC DataPortalENSG00000165192
TCGA cBioPortalASB11
AceView (NCBI)ASB11
Genatlas (Paris)ASB11
WikiGenes140456
SOURCE (Princeton)ASB11
Genetics Home Reference (NIH)ASB11
Genomic and cartography
GoldenPath hg38 (UCSC)ASB11  -     chrX:15281709-15314559 -  Xp22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ASB11  -     Xp22.2   [Description]    (hg19-Feb_2009)
EnsemblASB11 - Xp22.2 [CytoView hg19]  ASB11 - Xp22.2 [CytoView hg38]
Mapping of homologs : NCBIASB11 [Mapview hg19]  ASB11 [Mapview hg38]
OMIM300626   
Gene and transcription
Genbank (Entrez)AF425642 BC069340 BC103873 BC103874 BC103875
RefSeq transcript (Entrez)NM_001012428 NM_001201583 NM_080873
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ASB11
Cluster EST : UnigeneHs.352183 [ NCBI ]
CGAP (NCI)Hs.352183
Alternative Splicing GalleryENSG00000165192
Gene ExpressionASB11 [ NCBI-GEO ]   ASB11 [ EBI - ARRAY_EXPRESS ]   ASB11 [ SEEK ]   ASB11 [ MEM ]
Gene Expression Viewer (FireBrowse)ASB11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140456
GTEX Portal (Tissue expression)ASB11
Human Protein AtlasENSG00000165192-ASB11 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WXH4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WXH4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WXH4
Splice isoforms : SwissVarQ8WXH4
PhosPhoSitePlusQ8WXH4
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    SOCS (PS50225)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    SOCS_box   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    SOCS_box (PF07525)   
Domain families : Pfam (NCBI)pfam12796    pfam07525   
Domain families : Smart (EMBL)ANK (SM00248)  SOCS_box (SM00969)  
Conserved Domain (NCBI)ASB11
DMDM Disease mutations140456
Blocks (Seattle)ASB11
PDB (SRS)4UUC   
PDB (PDBSum)4UUC   
PDB (IMB)4UUC   
PDB (RSDB)4UUC   
Structural Biology KnowledgeBase4UUC   
SCOP (Structural Classification of Proteins)4UUC   
CATH (Classification of proteins structures)4UUC   
SuperfamilyQ8WXH4
Human Protein Atlas [tissue]ENSG00000165192-ASB11 [tissue]
Peptide AtlasQ8WXH4
HPRD06450
IPIIPI00103543   IPI00946569   IPI00385339   IPI00946996   
Protein Interaction databases
DIP (DOE-UCLA)Q8WXH4
IntAct (EBI)Q8WXH4
FunCoupENSG00000165192
BioGRIDASB11
STRING (EMBL)ASB11
ZODIACASB11
Ontologies - Pathways
QuickGOQ8WXH4
Ontology : AmiGOintracellular  protein ubiquitination  intracellular signal transduction  
Ontology : EGO-EBIintracellular  protein ubiquitination  intracellular signal transduction  
NDEx NetworkASB11
Atlas of Cancer Signalling NetworkASB11
Wikipedia pathwaysASB11
Orthology - Evolution
OrthoDB140456
GeneTree (enSembl)ENSG00000165192
Phylogenetic Trees/Animal Genes : TreeFamASB11
HOVERGENQ8WXH4
HOGENOMQ8WXH4
Homologs : HomoloGeneASB11
Homology/Alignments : Family Browser (UCSC)ASB11
Gene fusions - Rearrangements
Tumor Fusion PortalASB11
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerASB11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ASB11
dbVarASB11
ClinVarASB11
1000_GenomesASB11 
Exome Variant ServerASB11
ExAC (Exome Aggregation Consortium)ENSG00000165192
GNOMAD BrowserENSG00000165192
Genetic variants : HAPMAP140456
Genomic Variants (DGV)ASB11 [DGVbeta]
DECIPHERASB11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisASB11 
Mutations
ICGC Data PortalASB11 
TCGA Data PortalASB11 
Broad Tumor PortalASB11
OASIS PortalASB11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICASB11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDASB11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch ASB11
DgiDB (Drug Gene Interaction Database)ASB11
DoCM (Curated mutations)ASB11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ASB11 (select a term)
intoGenASB11
Cancer3DASB11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300626   
Orphanet
DisGeNETASB11
MedgenASB11
Genetic Testing Registry ASB11
NextProtQ8WXH4 [Medical]
TSGene140456
GENETestsASB11
Target ValidationASB11
Huge Navigator ASB11 [HugePedia]
snp3D : Map Gene to Disease140456
BioCentury BCIQASB11
ClinGenASB11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140456
Chemical/Pharm GKB GenePA25029
Clinical trialASB11
Miscellaneous
canSAR (ICR)ASB11 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASB11
EVEXASB11
GoPubMedASB11
iHOPASB11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:19:22 CET 2017

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