Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ASB14 (ankyrin repeat and SOCS box containing 14)

Identity

Alias_namesankyrin repeat and SOCS box-containing 14
Alias_symbol (synonym)DKFZp313L0121
Other alias-
HGNC (Hugo) ASB14
LocusID (NCBI) 142686
Atlas_Id 60553
Location 3p14.3  [Link to chromosome band 3p14]
Location_base_pair Starts at 57302379 and ends at 57326710 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASB14   19766
Cards
Entrez_Gene (NCBI)ASB14  142686  ankyrin repeat and SOCS box containing 14
Aliases
GeneCards (Weizmann)ASB14
Ensembl hg19 (Hinxton)ENSG00000239388 [Gene_View]  chr3:57302379-57326710 [Contig_View]  ASB14 [Vega]
Ensembl hg38 (Hinxton)ENSG00000239388 [Gene_View]  chr3:57302379-57326710 [Contig_View]  ASB14 [Vega]
ICGC DataPortalENSG00000239388
TCGA cBioPortalASB14
AceView (NCBI)ASB14
Genatlas (Paris)ASB14
WikiGenes142686
SOURCE (Princeton)ASB14
Genetics Home Reference (NIH)ASB14
Genomic and cartography
GoldenPath hg19 (UCSC)ASB14  -     chr3:57302379-57326710 -  3p14.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ASB14  -     3p14.3   [Description]    (hg38-Dec_2013)
EnsemblASB14 - 3p14.3 [CytoView hg19]  ASB14 - 3p14.3 [CytoView hg38]
Mapping of homologs : NCBIASB14 [Mapview hg19]  ASB14 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF403032 AL832472 BC114953 BE004392
RefSeq transcript (Entrez)NM_001142733 NM_130387
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_022517 NW_004929309
Consensus coding sequences : CCDS (NCBI)ASB14
Cluster EST : UnigeneHs.745243 [ NCBI ]
CGAP (NCI)Hs.745243
Alternative Splicing GalleryENSG00000239388
Gene ExpressionASB14 [ NCBI-GEO ]   ASB14 [ EBI - ARRAY_EXPRESS ]   ASB14 [ SEEK ]   ASB14 [ MEM ]
Gene Expression Viewer (FireBrowse)ASB14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)142686
GTEX Portal (Tissue expression)ASB14
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NK59   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NK59  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NK59
Splice isoforms : SwissVarA6NK59
PhosPhoSitePlusA6NK59
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    SOCS (PS50225)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    SOCS_C   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    SOCS_box (PF07525)   
Domain families : Pfam (NCBI)pfam12796    pfam07525   
Domain families : Smart (EMBL)ANK (SM00248)  SOCS_box (SM00969)  
Conserved Domain (NCBI)ASB14
DMDM Disease mutations142686
Blocks (Seattle)ASB14
SuperfamilyA6NK59
Human Protein AtlasENSG00000239388
Peptide AtlasA6NK59
HPRD10668
IPIIPI00783530   IPI00940847   IPI00749248   IPI00977209   
Protein Interaction databases
DIP (DOE-UCLA)A6NK59
IntAct (EBI)A6NK59
FunCoupENSG00000239388
BioGRIDASB14
STRING (EMBL)ASB14
ZODIACASB14
Ontologies - Pathways
QuickGOA6NK59
Ontology : AmiGOintracellular  protein ubiquitination  intracellular signal transduction  
Ontology : EGO-EBIintracellular  protein ubiquitination  intracellular signal transduction  
NDEx NetworkASB14
Atlas of Cancer Signalling NetworkASB14
Wikipedia pathwaysASB14
Orthology - Evolution
OrthoDB142686
GeneTree (enSembl)ENSG00000239388
Phylogenetic Trees/Animal Genes : TreeFamASB14
HOVERGENA6NK59
HOGENOMA6NK59
Homologs : HomoloGeneASB14
Homology/Alignments : Family Browser (UCSC)ASB14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerASB14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ASB14
dbVarASB14
ClinVarASB14
1000_GenomesASB14 
Exome Variant ServerASB14
ExAC (Exome Aggregation Consortium)ASB14 (select the gene name)
Genetic variants : HAPMAP142686
Genomic Variants (DGV)ASB14 [DGVbeta]
DECIPHER (Syndromes)3:57302379-57326710  ENSG00000239388
CONAN: Copy Number AnalysisASB14 
Mutations
ICGC Data PortalASB14 
TCGA Data PortalASB14 
Broad Tumor PortalASB14
OASIS PortalASB14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICASB14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDASB14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ASB14
DgiDB (Drug Gene Interaction Database)ASB14
DoCM (Curated mutations)ASB14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ASB14 (select a term)
intoGenASB14
Cancer3DASB14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenASB14
Genetic Testing Registry ASB14
NextProtA6NK59 [Medical]
TSGene142686
GENETestsASB14
Huge Navigator ASB14 [HugePedia]
snp3D : Map Gene to Disease142686
BioCentury BCIQASB14
ClinGenASB14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD142686
Chemical/Pharm GKB GenePA134983884
Clinical trialASB14
Miscellaneous
canSAR (ICR)ASB14 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASB14
EVEXASB14
GoPubMedASB14
iHOPASB14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:55:09 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.