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ASB15 (ankyrin repeat and SOCS box containing 15)

Identity

Alias_namesankyrin repeat and SOCS box-containing 15
Alias_symbol (synonym)FLJ43370
Other alias-
HGNC (Hugo) ASB15
LocusID (NCBI) 142685
Atlas_Id 60554
Location 7q31.32  [Link to chromosome band 7q31]
Location_base_pair Starts at 123601867 and ends at 123637880 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
IQUB (7q31.32) / ASB15 (7q31.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASB15   19767
Cards
Entrez_Gene (NCBI)ASB15  142685  ankyrin repeat and SOCS box containing 15
Aliases
GeneCards (Weizmann)ASB15
Ensembl hg19 (Hinxton)ENSG00000146809 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146809 [Gene_View]  chr7:123601867-123637880 [Contig_View]  ASB15 [Vega]
ICGC DataPortalENSG00000146809
TCGA cBioPortalASB15
AceView (NCBI)ASB15
Genatlas (Paris)ASB15
WikiGenes142685
SOURCE (Princeton)ASB15
Genetics Home Reference (NIH)ASB15
Genomic and cartography
GoldenPath hg38 (UCSC)ASB15  -     chr7:123601867-123637880 +  7q31.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ASB15  -     7q31.32   [Description]    (hg19-Feb_2009)
EnsemblASB15 - 7q31.32 [CytoView hg19]  ASB15 - 7q31.32 [CytoView hg38]
Mapping of homologs : NCBIASB15 [Mapview hg19]  ASB15 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF403033 AF428257 AK125360 BC100874 BC100875
RefSeq transcript (Entrez)NM_001290258 NM_080928
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ASB15
Cluster EST : UnigeneHs.83916 [ NCBI ]
CGAP (NCI)Hs.83916
Alternative Splicing GalleryENSG00000146809
Gene ExpressionASB15 [ NCBI-GEO ]   ASB15 [ EBI - ARRAY_EXPRESS ]   ASB15 [ SEEK ]   ASB15 [ MEM ]
Gene Expression Viewer (FireBrowse)ASB15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)142685
GTEX Portal (Tissue expression)ASB15
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WXK1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WXK1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WXK1
Splice isoforms : SwissVarQ8WXK1
PhosPhoSitePlusQ8WXK1
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    SOCS (PS50225)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    SOCS_box   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    SOCS_box (PF07525)   
Domain families : Pfam (NCBI)pfam12796    pfam07525   
Domain families : Smart (EMBL)ANK (SM00248)  SOCS (SM00253)  SOCS_box (SM00969)  
Conserved Domain (NCBI)ASB15
DMDM Disease mutations142685
Blocks (Seattle)ASB15
SuperfamilyQ8WXK1
Human Protein AtlasENSG00000146809
Peptide AtlasQ8WXK1
HPRD10669
IPIIPI00103563   IPI01012631   IPI00925512   IPI00925011   
Protein Interaction databases
DIP (DOE-UCLA)Q8WXK1
IntAct (EBI)Q8WXK1
FunCoupENSG00000146809
BioGRIDASB15
STRING (EMBL)ASB15
ZODIACASB15
Ontologies - Pathways
QuickGOQ8WXK1
Ontology : AmiGOubiquitin ligase complex  ubiquitin-protein transferase activity  nucleus  cytoplasm  protein ubiquitination  ubiquitin protein ligase binding  intracellular signal transduction  
Ontology : EGO-EBIubiquitin ligase complex  ubiquitin-protein transferase activity  nucleus  cytoplasm  protein ubiquitination  ubiquitin protein ligase binding  intracellular signal transduction  
NDEx NetworkASB15
Atlas of Cancer Signalling NetworkASB15
Wikipedia pathwaysASB15
Orthology - Evolution
OrthoDB142685
GeneTree (enSembl)ENSG00000146809
Phylogenetic Trees/Animal Genes : TreeFamASB15
HOVERGENQ8WXK1
HOGENOMQ8WXK1
Homologs : HomoloGeneASB15
Homology/Alignments : Family Browser (UCSC)ASB15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerASB15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ASB15
dbVarASB15
ClinVarASB15
1000_GenomesASB15 
Exome Variant ServerASB15
ExAC (Exome Aggregation Consortium)ASB15 (select the gene name)
Genetic variants : HAPMAP142685
Genomic Variants (DGV)ASB15 [DGVbeta]
DECIPHERASB15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisASB15 
Mutations
ICGC Data PortalASB15 
TCGA Data PortalASB15 
Broad Tumor PortalASB15
OASIS PortalASB15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICASB15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDASB15
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ASB15
DgiDB (Drug Gene Interaction Database)ASB15
DoCM (Curated mutations)ASB15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ASB15 (select a term)
intoGenASB15
Cancer3DASB15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenASB15
Genetic Testing Registry ASB15
NextProtQ8WXK1 [Medical]
TSGene142685
GENETestsASB15
Target ValidationASB15
Huge Navigator ASB15 [HugePedia]
snp3D : Map Gene to Disease142685
BioCentury BCIQASB15
ClinGenASB15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD142685
Chemical/Pharm GKB GenePA134977130
Clinical trialASB15
Miscellaneous
canSAR (ICR)ASB15 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASB15
EVEXASB15
GoPubMedASB15
iHOPASB15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:52 CEST 2017

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