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ASB2 (ankyrin repeat and SOCS box containing 2)

Identity

Other namesASB-2
HGNC (Hugo) ASB2
LocusID (NCBI) 51676
Location 14q32.12
Location_base_pair Starts at 94400499 and ends at 94443076 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ASB2   16012
Entrez_Gene (NCBI)ASB2  51676  ankyrin repeat and SOCS box containing 2
Cards
GeneCards (Weizmann)ASB2
Ensembl (Hinxton)ENSG00000100628 [Gene_View]  chr14:94400499-94443076 [Contig_View]  ASB2 [Vega]
AceView (NCBI)ASB2
Genatlas (Paris)ASB2
SOURCE (Stanford)NM_001202429 NM_016150
Genomic and cartography
GoldenPath (UCSC)ASB2  -  14q32.12   chr14:94400499-94443076 -  14q32.12   [Description]    (hg19-Feb_2009)
EnsemblASB2 - 14q32.12 [CytoView]
Mapping of homologs : NCBIASB2 [Mapview]
OMIM605759   
Gene and transcription
Genbank (Entrez)AB056723 AB488462 AF159164 AJ251238 AK002049
RefSeq transcript (SRS)NM_001202429 NM_016150
RefSeq transcript (Entrez)NM_001202429 NM_016150
RefSeq genomic (SRS)AC_000146 NC_000014 NC_018925 NT_026437 NW_001838113 NW_004078079
RefSeq genomic (Entrez)AC_000146 NC_000014 NC_018925 NT_026437 NW_001838113 NW_004078079
Consensus coding sequences : CCDS (NCBI)ASB2
Cluster EST : UnigeneHs.510327 [ SRS ] Hs.510327 [ NCBI ]
CGAP (NCI)Hs.510327
Alternative Splicing : Fast-db (Paris)GSHG0009586
Alternative Splicing GalleryENSG00000100628
Gene ExpressionASB2 [ NCBI-GEO ]   ASB2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96Q27 (SRS) Q96Q27 (Uniprot)
NextProtQ96Q27
With graphics : InterProQ96Q27
Splice isoforms : SwissVarQ96Q27(Swissvar)
Domaine pattern : Prosite (SRS)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    SOCS (PS50225)   
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    SOCS (PS50225)   
Domains : Interpro (SRS)Ankyrin_rpt    Ankyrin_rpt-contain_dom    SOCS_C   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    SOCS_C   
Related proteins : CluSTrQ96Q27
Domain families : Pfam (SRS)Ank_2 (PF12796)    SOCS_box (PF07525)   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    SOCS_box (PF07525)   
Domain families : Pfam (NCBI)pfam12796    pfam07525   
Domain families : Smart (EMBL)ANK (SM00248)  SOCS_box (SM00969)  
DMDM51676
Blocks (Seattle)Q96Q27
Human Protein AtlasENSG00000100628
HPRD05768
IPIIPI00939922   IPI00216028   IPI01016013   IPI01025210   IPI01025320   IPI01024952   IPI01025129   IPI01024720   
Protein Interaction databases
DIP (DOE-UCLA)Q96Q27
IntAct (EBI)Q96Q27
FunCoupENSG00000100628
REACTOMEASB2
Protein Interaction Database51676
BioGRIDASB2
InParanoidQ96Q27
Interologous Interaction database Q96Q27
IntegromeDBASB2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ASB2
SNP (GeneSNP Utah)ASB2
SNP : HGBaseASB2
Genetic variants : HAPMAPASB2
Somatic Mutations in Cancer : COSMICASB2 
CONAN: Copy Number AnalysisASB2 
Mutations and Diseases : HGMDASB2
OMIM605759   
GENETests605759   
Disease Genetic AssociationASB2
Huge Navigator ASB2 [HugePedia]  ASB2 [HugeCancerGEM]
Genomic VariantsASB2  ASB2 [DGVbeta]
snp3D : Map Gene to Disease51676
General knowledge
Homologs : HomoloGeneASB2
Homology/Alignments : Family Browser (UCSC)ASB2
Phylogenetic Trees/Animal Genes : TreeFamASB2
Chemical/Protein Interactions : CTD51676
Chemical/Pharm GKB GenePA25030
Clinical trialASB2
Cancer Resource (Charite)ENSG00000100628
Ontology : AmiGOintracellular  signal transduction  protein ubiquitination  intracellular signal transduction  
Ontology : EGO-EBIintracellular  signal transduction  protein ubiquitination  intracellular signal transduction  
Other databases
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
PubGeneASB2
iHOPASB2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:35:19 CEST 2013
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