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ASB7 (ankyrin repeat and SOCS box containing 7)

Identity

Alias_namesankyrin repeat and SOCS box-containing 7
Other alias-
HGNC (Hugo) ASB7
LocusID (NCBI) 140460
Atlas_Id 60563
Location 15q26.3  [Link to chromosome band 15q26]
Location_base_pair Starts at 100602550 and ends at 100630209 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASB7   17182
Cards
Entrez_Gene (NCBI)ASB7  140460  ankyrin repeat and SOCS box containing 7
Aliases
GeneCards (Weizmann)ASB7
Ensembl hg19 (Hinxton)ENSG00000183475 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183475 [Gene_View]  chr15:100602550-100630209 [Contig_View]  ASB7 [Vega]
ICGC DataPortalENSG00000183475
TCGA cBioPortalASB7
AceView (NCBI)ASB7
Genatlas (Paris)ASB7
WikiGenes140460
SOURCE (Princeton)ASB7
Genetics Home Reference (NIH)ASB7
Genomic and cartography
GoldenPath hg38 (UCSC)ASB7  -     chr15:100602550-100630209 +  15q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ASB7  -     15q26.3   [Description]    (hg19-Feb_2009)
EnsemblASB7 - 15q26.3 [CytoView hg19]  ASB7 - 15q26.3 [CytoView hg38]
Mapping of homologs : NCBIASB7 [Mapview hg19]  ASB7 [Mapview hg38]
OMIM615052   
Gene and transcription
Genbank (Entrez)AA830153 AF451994 AK026204 AK057921 AK094123
RefSeq transcript (Entrez)NM_024708 NM_198243
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ASB7
Cluster EST : UnigeneHs.709044 [ NCBI ]
CGAP (NCI)Hs.709044
Alternative Splicing GalleryENSG00000183475
Gene ExpressionASB7 [ NCBI-GEO ]   ASB7 [ EBI - ARRAY_EXPRESS ]   ASB7 [ SEEK ]   ASB7 [ MEM ]
Gene Expression Viewer (FireBrowse)ASB7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140460
GTEX Portal (Tissue expression)ASB7
Human Protein AtlasENSG00000183475-ASB7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H672   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H672  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H672
Splice isoforms : SwissVarQ9H672
PhosPhoSitePlusQ9H672
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    SOCS (PS50225)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    SOCS_box   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    SOCS_box (PF07525)   
Domain families : Pfam (NCBI)pfam12796    pfam07525   
Domain families : Smart (EMBL)ANK (SM00248)  SOCS (SM00253)  SOCS_box (SM00969)  
Conserved Domain (NCBI)ASB7
DMDM Disease mutations140460
Blocks (Seattle)ASB7
SuperfamilyQ9H672
Human Protein Atlas [tissue]ENSG00000183475-ASB7 [tissue]
Peptide AtlasQ9H672
HPRD10674
IPIIPI00385151   IPI00395026   
Protein Interaction databases
DIP (DOE-UCLA)Q9H672
IntAct (EBI)Q9H672
FunCoupENSG00000183475
BioGRIDASB7
STRING (EMBL)ASB7
ZODIACASB7
Ontologies - Pathways
QuickGOQ9H672
Ontology : AmiGOprotein binding  intracellular  protein ubiquitination  intracellular signal transduction  
Ontology : EGO-EBIprotein binding  intracellular  protein ubiquitination  intracellular signal transduction  
NDEx NetworkASB7
Atlas of Cancer Signalling NetworkASB7
Wikipedia pathwaysASB7
Orthology - Evolution
OrthoDB140460
GeneTree (enSembl)ENSG00000183475
Phylogenetic Trees/Animal Genes : TreeFamASB7
HOVERGENQ9H672
HOGENOMQ9H672
Homologs : HomoloGeneASB7
Homology/Alignments : Family Browser (UCSC)ASB7
Gene fusions - Rearrangements
Tumor Fusion PortalASB7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerASB7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ASB7
dbVarASB7
ClinVarASB7
1000_GenomesASB7 
Exome Variant ServerASB7
ExAC (Exome Aggregation Consortium)ENSG00000183475
GNOMAD BrowserENSG00000183475
Genetic variants : HAPMAP140460
Genomic Variants (DGV)ASB7 [DGVbeta]
DECIPHERASB7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisASB7 
Mutations
ICGC Data PortalASB7 
TCGA Data PortalASB7 
Broad Tumor PortalASB7
OASIS PortalASB7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICASB7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDASB7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ASB7
DgiDB (Drug Gene Interaction Database)ASB7
DoCM (Curated mutations)ASB7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ASB7 (select a term)
intoGenASB7
Cancer3DASB7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615052   
Orphanet
DisGeNETASB7
MedgenASB7
Genetic Testing Registry ASB7
NextProtQ9H672 [Medical]
TSGene140460
GENETestsASB7
Target ValidationASB7
Huge Navigator ASB7 [HugePedia]
snp3D : Map Gene to Disease140460
BioCentury BCIQASB7
ClinGenASB7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140460
Chemical/Pharm GKB GenePA25035
Clinical trialASB7
Miscellaneous
canSAR (ICR)ASB7 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASB7
EVEXASB7
GoPubMedASB7
iHOPASB7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:19:24 CET 2017

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