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ASB9 (ankyrin repeat and SOCS box containing 9)

Identity

Other names-
HGNC (Hugo) ASB9
LocusID (NCBI) 140462
Location Xp22.2
Location_base_pair Starts at 15262109 and ends at 15288293 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)ASB9   17184
Entrez_Gene (NCBI)ASB9  140462  ankyrin repeat and SOCS box containing 9
Cards
GeneCards (Weizmann)ASB9
Ensembl (Hinxton)ENSG00000102048 [Gene_View]  chrX:15262109-15288293 [Contig_View]  ASB9 [Vega]
AceView (NCBI)ASB9
Genatlas (Paris)ASB9
SOURCE (Stanford)NM_001031739 NM_001168530 NM_001168531 NM_024087
Genomic and cartography
GoldenPath (UCSC)ASB9  -  Xp22.2   chrX:15262109-15288293 -  Xp22.2   [Description]    (hg19-Feb_2009)
EnsemblASB9 - Xp22.2 [CytoView]
Mapping of homologs : NCBIASB9 [Mapview]
Gene and transcription
Genbank (Entrez)AK000643 AK292270 AL080091 AY337578 BC001244
RefSeq transcript (SRS)NM_001031739 NM_001168530 NM_001168531 NM_024087
RefSeq transcript (Entrez)NM_001031739 NM_001168530 NM_001168531 NM_024087
RefSeq genomic (SRS)AC_000155 NC_000023 NC_018934 NG_016218 NT_167197 NW_001842360 NW_004078118
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_018934 NG_016218 NT_167197 NW_001842360 NW_004078118
Consensus coding sequences : CCDS (NCBI)ASB9
Cluster EST : UnigeneHs.19404 [ SRS ] Hs.19404 [ NCBI ]
CGAP (NCI)Hs.19404
Alternative Splicing : Fast-db (Paris)GSHG0031983
Alternative Splicing GalleryENSG00000102048
Gene ExpressionASB9 [ NCBI-GEO ]   ASB9 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96DX5 (SRS) Q96DX5 (Uniprot)
NextProtQ96DX5
With graphics : InterProQ96DX5
Splice isoforms : SwissVarQ96DX5(Swissvar)
Domaine pattern : Prosite (SRS)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    SOCS (PS50225)   
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    SOCS (PS50225)   
Domains : Interpro (SRS)Ankyrin_rpt    Ankyrin_rpt-contain_dom    SOCS_C   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    SOCS_C   
Related proteins : CluSTrQ96DX5
Domain families : Pfam (SRS)Ank_2 (PF12796)    SOCS_box (PF07525)   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    SOCS_box (PF07525)   
Domain families : Pfam (NCBI)pfam12796    pfam07525   
Domain families : Smart (EMBL)ANK (SM00248)  SOCS_box (SM00969)  
DMDM140462
Blocks (Seattle)Q96DX5
PDB (SRS)2XAI    3D9H   
PDB (PDBSum)2XAI    3D9H   
PDB (IMB)2XAI    3D9H   
PDB (RSDB)2XAI    3D9H   
Human Protein AtlasENSG00000102048
HPRD06452
IPIIPI00179183   IPI00216580   IPI00385067   IPI00643086   
Protein Interaction databases
DIP (DOE-UCLA)Q96DX5
IntAct (EBI)Q96DX5
FunCoupENSG00000102048
REACTOMEASB9
Protein Interaction Database140462
BioGRIDASB9
InParanoidQ96DX5
Interologous Interaction database Q96DX5
IntegromeDBASB9
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ASB9
SNP (GeneSNP Utah)ASB9
SNP : HGBaseASB9
Genetic variants : HAPMAPASB9
Somatic Mutations in Cancer : COSMICASB9 
CONAN: Copy Number AnalysisASB9 
Mutations and Diseases : HGMDASB9
OMIM
GENETests
Disease Genetic AssociationASB9
Huge Navigator ASB9 [HugePedia]  ASB9 [HugeCancerGEM]
Genomic VariantsASB9  ASB9 [DGVbeta]
snp3D : Map Gene to Disease140462
General knowledge
Homologs : HomoloGeneASB9
Homology/Alignments : Family Browser (UCSC)ASB9
Phylogenetic Trees/Animal Genes : TreeFamASB9
Chemical/Protein Interactions : CTD140462
Chemical/Pharm GKB GenePA25037
Clinical trialASB9
Cancer Resource (Charite)ENSG00000102048
Ontology : AmiGOprotein binding  nucleus  nucleolus  cytoplasm  mitochondrion  protein ubiquitination  protein ubiquitination  intracellular signal transduction  positive regulation of protein catabolic process  
Ontology : EGO-EBIprotein binding  nucleus  nucleolus  cytoplasm  mitochondrion  protein ubiquitination  protein ubiquitination  intracellular signal transduction  positive regulation of protein catabolic process  
Other databases
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
PubGeneASB9
iHOPASB9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:35:34 CEST 2013
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