Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ASMTL-AS1 (ASMTL antisense RNA 1)

Identity

Alias_namesCXYorf2
NCRNA00105
ASMTLAS
ASMTL-AS
chromosome X and Y open reading frame 2
non-protein coding RNA 105
ASMTL antisense RNA (non-protein coding)
ASMTL antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)FLJ13330
HGNC (Hugo) ASMTL-AS1
LocusID (NCBI) 80161
Atlas_Id 60575
Location Yp11.32  [Link to chromosome band Yp11]
Location_base_pair Starts at 1470936 and ends at 1484314 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASMTL-AS1   25811
Cards
Entrez_Gene (NCBI)ASMTL-AS1  80161  ASMTL antisense RNA 1
AliasesASMTL-AS; ASMTLAS; CXYorf2; NCRNA00105
GeneCards (Weizmann)ASMTL-AS1
Ensembl hg19 (Hinxton) [Gene_View]  chrY:1470936-1484314 [Contig_View]  ASMTL-AS1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chrY:1470936-1484314 [Contig_View]  ASMTL-AS1 [Vega]
TCGA cBioPortalASMTL-AS1
AceView (NCBI)ASMTL-AS1
Genatlas (Paris)ASMTL-AS1
WikiGenes80161
SOURCE (Princeton)ASMTL-AS1
Genetics Home Reference (NIH)ASMTL-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)ASMTL-AS1  -     chrY:1470936-1484314 +  Yp11.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ASMTL-AS1  -     Yp11.32   [Description]    (hg38-Dec_2013)
EnsemblASMTL-AS1 - Yp11.32 [CytoView hg19]  ASMTL-AS1 - Yp11.32 [CytoView hg38]
Mapping of homologs : NCBIASMTL-AS1 [Mapview hg19]  ASMTL-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF193043 AK023392 BC093994 BC143527 HG512403
RefSeq transcript (Entrez)NM_025091
RefSeq genomic (Entrez)NC_000023 NC_000024 NC_018934 NG_030331 NT_167201 NT_187358 NW_004929437
Consensus coding sequences : CCDS (NCBI)ASMTL-AS1
Cluster EST : UnigeneHs.521856 [ NCBI ]
CGAP (NCI)Hs.521856
Gene ExpressionASMTL-AS1 [ NCBI-GEO ]   ASMTL-AS1 [ EBI - ARRAY_EXPRESS ]   ASMTL-AS1 [ SEEK ]   ASMTL-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ASMTL-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)80161
GTEX Portal (Tissue expression)ASMTL-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ASMTL-AS1
DMDM Disease mutations80161
Blocks (Seattle)ASMTL-AS1
HPRD06522
Protein Interaction databases
BioGRIDASMTL-AS1
STRING (EMBL)ASMTL-AS1
ZODIACASMTL-AS1
Ontologies - Pathways
Huge Navigator ASMTL-AS1 [HugePedia]
snp3D : Map Gene to Disease80161
BioCentury BCIQASMTL-AS1
ClinGenASMTL-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80161
Chemical/Pharm GKB GenePA165756431
Clinical trialASMTL-AS1
Miscellaneous
canSAR (ICR)ASMTL-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASMTL-AS1
EVEXASMTL-AS1
GoPubMedASMTL-AS1
iHOPASMTL-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Dec 29 13:19:17 CET 2016

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