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ASNA1 (arsA arsenite transporter, ATP-binding, homolog 1 (bacterial))

Identity

Alias_namesarsA (bacterial) arsenite transporter
Alias_symbol (synonym)ARSA-I
GET3
TRC40
Other aliasARSA1
ASNA-I
HGNC (Hugo) ASNA1
LocusID (NCBI) 439
Atlas_Id 51237
Location 19p13.13  [Link to chromosome band 19p13]
Location_base_pair Starts at 12737459 and ends at 12748324 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ASNA1 (19p13.2) / ASNA1 (19p13.2)ASNA1 (19p13.2) / GANAB (11q12.3)ASNA1 (19p13.2) / PAF1 (19q13.2)
PAF1 (19q13.2) / ASNA1 (19p13.2)RNASEH2A (19p13.2) / ASNA1 (19p13.2)SMYD2 (1q32.3) / ASNA1 (19p13.2)
WDR20 (14q32.31) / ASNA1 (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASNA1   752
Cards
Entrez_Gene (NCBI)ASNA1  439  arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)
AliasesARSA-I; ARSA1; ASNA-I; GET3; 
TRC40
GeneCards (Weizmann)ASNA1
Ensembl hg19 (Hinxton)ENSG00000198356 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198356 [Gene_View]  chr19:12737459-12748324 [Contig_View]  ASNA1 [Vega]
ICGC DataPortalENSG00000198356
TCGA cBioPortalASNA1
AceView (NCBI)ASNA1
Genatlas (Paris)ASNA1
WikiGenes439
SOURCE (Princeton)ASNA1
Genetics Home Reference (NIH)ASNA1
Genomic and cartography
GoldenPath hg38 (UCSC)ASNA1  -     chr19:12737459-12748324 +  19p13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ASNA1  -     19p13.13   [Description]    (hg19-Feb_2009)
EnsemblASNA1 - 19p13.13 [CytoView hg19]  ASNA1 - 19p13.13 [CytoView hg38]
Mapping of homologs : NCBIASNA1 [Mapview hg19]  ASNA1 [Mapview hg38]
OMIM601913   
Gene and transcription
Genbank (Entrez)AF047469 AK223363 AK291855 AK293588 BC002651
RefSeq transcript (Entrez)NM_004317
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ASNA1
Cluster EST : UnigeneHs.465985 [ NCBI ]
CGAP (NCI)Hs.465985
Alternative Splicing GalleryENSG00000198356
Gene ExpressionASNA1 [ NCBI-GEO ]   ASNA1 [ EBI - ARRAY_EXPRESS ]   ASNA1 [ SEEK ]   ASNA1 [ MEM ]
Gene Expression Viewer (FireBrowse)ASNA1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)439
GTEX Portal (Tissue expression)ASNA1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43681   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43681  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43681
Splice isoforms : SwissVarO43681
PhosPhoSitePlusO43681
Domains : Interpro (EBI)Anion-transp_ATPase-like_dom    ATPase_ArsA/GET3    ATPase_ArsA/GET3_euk    P-loop_NTPase   
Domain families : Pfam (Sanger)ArsA_ATPase (PF02374)   
Domain families : Pfam (NCBI)pfam02374   
Conserved Domain (NCBI)ASNA1
DMDM Disease mutations439
Blocks (Seattle)ASNA1
SuperfamilyO43681
Human Protein AtlasENSG00000198356
Peptide AtlasO43681
HPRD03555
IPIIPI00013466   IPI00910220   
Protein Interaction databases
DIP (DOE-UCLA)O43681
IntAct (EBI)O43681
FunCoupENSG00000198356
BioGRIDASNA1
STRING (EMBL)ASNA1
ZODIACASNA1
Ontologies - Pathways
QuickGOO43681
Ontology : AmiGOtransporter activity  protein binding  ATP binding  nucleus  nucleolus  cytoplasm  endoplasmic reticulum membrane  transport  arsenite transmembrane transporter activity  inorganic anion transport  IRE1-mediated unfolded protein response  ATPase activity, coupled to movement of substances  metal ion binding  extracellular exosome  
Ontology : EGO-EBItransporter activity  protein binding  ATP binding  nucleus  nucleolus  cytoplasm  endoplasmic reticulum membrane  transport  arsenite transmembrane transporter activity  inorganic anion transport  IRE1-mediated unfolded protein response  ATPase activity, coupled to movement of substances  metal ion binding  extracellular exosome  
NDEx NetworkASNA1
Atlas of Cancer Signalling NetworkASNA1
Wikipedia pathwaysASNA1
Orthology - Evolution
OrthoDB439
GeneTree (enSembl)ENSG00000198356
Phylogenetic Trees/Animal Genes : TreeFamASNA1
HOVERGENO43681
HOGENOMO43681
Homologs : HomoloGeneASNA1
Homology/Alignments : Family Browser (UCSC)ASNA1
Gene fusions - Rearrangements
Fusion : MitelmanWDR20/ASNA1 [14q32.31/19p13.2]  [t(14;19)(q32;p13)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerASNA1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ASNA1
dbVarASNA1
ClinVarASNA1
1000_GenomesASNA1 
Exome Variant ServerASNA1
ExAC (Exome Aggregation Consortium)ASNA1 (select the gene name)
Genetic variants : HAPMAP439
Genomic Variants (DGV)ASNA1 [DGVbeta]
DECIPHERASNA1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisASNA1 
Mutations
ICGC Data PortalASNA1 
TCGA Data PortalASNA1 
Broad Tumor PortalASNA1
OASIS PortalASNA1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICASNA1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDASNA1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ASNA1
DgiDB (Drug Gene Interaction Database)ASNA1
DoCM (Curated mutations)ASNA1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ASNA1 (select a term)
intoGenASNA1
Cancer3DASNA1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601913   
Orphanet
MedgenASNA1
Genetic Testing Registry ASNA1
NextProtO43681 [Medical]
TSGene439
GENETestsASNA1
Target ValidationASNA1
Huge Navigator ASNA1 [HugePedia]
snp3D : Map Gene to Disease439
BioCentury BCIQASNA1
ClinGenASNA1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD439
Chemical/Pharm GKB GenePA25051
Clinical trialASNA1
Miscellaneous
canSAR (ICR)ASNA1 (select the gene name)
Probes
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASNA1
EVEXASNA1
GoPubMedASNA1
iHOPASNA1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:55:34 CEST 2017

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