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ASNSP1 (asparagine synthetase pseudogene 1)

Identity

Alias_namesASNSL1
asparagine synthetase-like 1
Other alias
HGNC (Hugo) ASNSP1
LocusID (NCBI) 389652
Atlas_Id 79332
Location 8q11.1  [Link to chromosome band 8q11]
Location_base_pair Starts at 46579215 and ends at 46617643 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASNSP1   754
Cards
Entrez_Gene (NCBI)ASNSP1  389652  asparagine synthetase pseudogene 1
AliasesASNSL1
GeneCards (Weizmann)ASNSP1
Ensembl hg19 (Hinxton)ENSG00000248498 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248498 [Gene_View]  chr8:46579215-46617643 [Contig_View]  ASNSP1 [Vega]
ICGC DataPortalENSG00000248498
TCGA cBioPortalASNSP1
AceView (NCBI)ASNSP1
Genatlas (Paris)ASNSP1
WikiGenes389652
SOURCE (Princeton)ASNSP1
Genetics Home Reference (NIH)ASNSP1
Genomic and cartography
GoldenPath hg38 (UCSC)ASNSP1  -     chr8:46579215-46617643 -  8q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ASNSP1  -     8q11.1   [Description]    (hg19-Feb_2009)
EnsemblASNSP1 - 8q11.1 [CytoView hg19]  ASNSP1 - 8q11.1 [CytoView hg38]
Mapping of homologs : NCBIASNSP1 [Mapview hg19]  ASNSP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ASNSP1
Alternative Splicing GalleryENSG00000248498
Gene ExpressionASNSP1 [ NCBI-GEO ]   ASNSP1 [ EBI - ARRAY_EXPRESS ]   ASNSP1 [ SEEK ]   ASNSP1 [ MEM ]
Gene Expression Viewer (FireBrowse)ASNSP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)389652
GTEX Portal (Tissue expression)ASNSP1
Human Protein AtlasENSG00000248498-ASNSP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ASNSP1
DMDM Disease mutations389652
Blocks (Seattle)ASNSP1
Human Protein Atlas [tissue]ENSG00000248498-ASNSP1 [tissue]
Protein Interaction databases
FunCoupENSG00000248498
BioGRIDASNSP1
STRING (EMBL)ASNSP1
ZODIACASNSP1
Ontologies - Pathways
Huge Navigator ASNSP1 [HugePedia]
snp3D : Map Gene to Disease389652
BioCentury BCIQASNSP1
ClinGenASNSP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389652
Chemical/Pharm GKB GenePA25053
Clinical trialASNSP1
Miscellaneous
canSAR (ICR)ASNSP1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineASNSP1
EVEXASNSP1
GoPubMedASNSP1
iHOPASNSP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:17:51 CET 2017

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