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ASPG (asparaginase)

Identity

Alias_namesC14orf76
chromosome 14 open reading frame 76
asparaginase homolog (S. cerevisiae)
Other aliasGPA/WT
HGNC (Hugo) ASPG
LocusID (NCBI) 374569
Atlas_Id 60579
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 104085686 and ends at 104112709 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASPG   20123
Cards
Entrez_Gene (NCBI)ASPG  374569  asparaginase
AliasesC14orf76; GPA/WT
GeneCards (Weizmann)ASPG
Ensembl hg19 (Hinxton)ENSG00000166183 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166183 [Gene_View]  chr14:104085686-104112709 [Contig_View]  ASPG [Vega]
ICGC DataPortalENSG00000166183
TCGA cBioPortalASPG
AceView (NCBI)ASPG
Genatlas (Paris)ASPG
WikiGenes374569
SOURCE (Princeton)ASPG
Genetics Home Reference (NIH)ASPG
Genomic and cartography
GoldenPath hg38 (UCSC)ASPG  -     chr14:104085686-104112709 +  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ASPG  -     14q32.33   [Description]    (hg19-Feb_2009)
EnsemblASPG - 14q32.33 [CytoView hg19]  ASPG - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBIASPG [Mapview hg19]  ASPG [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW024833 AX781433 AX781435 BC035836 BC136637
RefSeq transcript (Entrez)NM_001080464
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ASPG
Cluster EST : UnigeneHs.146239 [ NCBI ]
CGAP (NCI)Hs.146239
Alternative Splicing GalleryENSG00000166183
Gene ExpressionASPG [ NCBI-GEO ]   ASPG [ EBI - ARRAY_EXPRESS ]   ASPG [ SEEK ]   ASPG [ MEM ]
Gene Expression Viewer (FireBrowse)ASPG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374569
GTEX Portal (Tissue expression)ASPG
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86U10   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86U10  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86U10
Splice isoforms : SwissVarQ86U10
Catalytic activity : Enzyme3.1.1.5 [ Enzyme-Expasy ]   3.1.1.53.1.1.5 [ IntEnz-EBI ]   3.1.1.5 [ BRENDA ]   3.1.1.5 [ KEGG ]   
PhosPhoSitePlusQ86U10
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    ASN_GLN_ASE_2 (PS00917)    ASN_GLN_ASE_3 (PS51732)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    AsnASEI    Asparaginase/glutaminase    Asparaginase/glutaminase_AS2    L-asparaginase_C    L-asparaginase_N   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    Asparaginase (PF00710)   
Domain families : Pfam (NCBI)pfam12796    pfam00710   
Domain families : Smart (EMBL)ANK (SM00248)  Asparaginase (SM00870)  
Conserved Domain (NCBI)ASPG
DMDM Disease mutations374569
Blocks (Seattle)ASPG
SuperfamilyQ86U10
Human Protein AtlasENSG00000166183
Peptide AtlasQ86U10
IPIIPI00735641   IPI00985438   IPI01018099   IPI01021156   IPI01020712   IPI01021474   
Protein Interaction databases
DIP (DOE-UCLA)Q86U10
IntAct (EBI)Q86U10
FunCoupENSG00000166183
BioGRIDASPG
STRING (EMBL)ASPG
ZODIACASPG
Ontologies - Pathways
QuickGOQ86U10
Ontology : AmiGO1-alkyl-2-acetylglycerophosphocholine esterase activity  asparaginase activity  asparaginase activity  lysophospholipase activity  cytosol  asparagine catabolic process  cellular amino acid biosynthetic process  lipid catabolic process  
Ontology : EGO-EBI1-alkyl-2-acetylglycerophosphocholine esterase activity  asparaginase activity  asparaginase activity  lysophospholipase activity  cytosol  asparagine catabolic process  cellular amino acid biosynthetic process  lipid catabolic process  
NDEx NetworkASPG
Atlas of Cancer Signalling NetworkASPG
Wikipedia pathwaysASPG
Orthology - Evolution
OrthoDB374569
GeneTree (enSembl)ENSG00000166183
Phylogenetic Trees/Animal Genes : TreeFamASPG
HOVERGENQ86U10
HOGENOMQ86U10
Homologs : HomoloGeneASPG
Homology/Alignments : Family Browser (UCSC)ASPG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerASPG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ASPG
dbVarASPG
ClinVarASPG
1000_GenomesASPG 
Exome Variant ServerASPG
ExAC (Exome Aggregation Consortium)ASPG (select the gene name)
Genetic variants : HAPMAP374569
Genomic Variants (DGV)ASPG [DGVbeta]
DECIPHERASPG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisASPG 
Mutations
ICGC Data PortalASPG 
TCGA Data PortalASPG 
Broad Tumor PortalASPG
OASIS PortalASPG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICASPG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDASPG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ASPG
DgiDB (Drug Gene Interaction Database)ASPG
DoCM (Curated mutations)ASPG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ASPG (select a term)
intoGenASPG
Cancer3DASPG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenASPG
Genetic Testing Registry ASPG
NextProtQ86U10 [Medical]
TSGene374569
GENETestsASPG
Target ValidationASPG
Huge Navigator ASPG [HugePedia]
snp3D : Map Gene to Disease374569
BioCentury BCIQASPG
ClinGenASPG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374569
Clinical trialASPG
Miscellaneous
canSAR (ICR)ASPG (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASPG
EVEXASPG
GoPubMedASPG
iHOPASPG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:55 CEST 2017

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