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ASPRV1 (aspartic peptidase, retroviral-like 1)

Identity

Alias_symbol (synonym)Taps
SASPase
FLJ25084
Other aliasMUNO
SASP
HGNC (Hugo) ASPRV1
LocusID (NCBI) 151516
Atlas_Id 47620
Location 2p13.3  [Link to chromosome band 2p13]
Location_base_pair Starts at 69960091 and ends at 69962265 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASPRV1   26321
Cards
Entrez_Gene (NCBI)ASPRV1  151516  aspartic peptidase, retroviral-like 1
AliasesMUNO; SASP; SASPase; Taps
GeneCards (Weizmann)ASPRV1
Ensembl hg19 (Hinxton)ENSG00000244617 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244617 [Gene_View]  chr2:69960091-69962265 [Contig_View]  ASPRV1 [Vega]
ICGC DataPortalENSG00000244617
TCGA cBioPortalASPRV1
AceView (NCBI)ASPRV1
Genatlas (Paris)ASPRV1
WikiGenes151516
SOURCE (Princeton)ASPRV1
Genetics Home Reference (NIH)ASPRV1
Genomic and cartography
GoldenPath hg38 (UCSC)ASPRV1  -     chr2:69960091-69962265 -  2p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ASPRV1  -     2p13.3   [Description]    (hg19-Feb_2009)
EnsemblASPRV1 - 2p13.3 [CytoView hg19]  ASPRV1 - 2p13.3 [CytoView hg38]
Mapping of homologs : NCBIASPRV1 [Mapview hg19]  ASPRV1 [Mapview hg38]
OMIM611765   
Gene and transcription
Genbank (Entrez)AK055994 AK057813 BC031997 BC094000 BC094002
RefSeq transcript (Entrez)NM_152792
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ASPRV1
Cluster EST : UnigeneHs.516253 [ NCBI ]
CGAP (NCI)Hs.516253
Alternative Splicing GalleryENSG00000244617
Gene ExpressionASPRV1 [ NCBI-GEO ]   ASPRV1 [ EBI - ARRAY_EXPRESS ]   ASPRV1 [ SEEK ]   ASPRV1 [ MEM ]
Gene Expression Viewer (FireBrowse)ASPRV1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)151516
GTEX Portal (Tissue expression)ASPRV1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ53RT3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ53RT3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ53RT3
Splice isoforms : SwissVarQ53RT3
Catalytic activity : Enzyme3.4.23.- [ Enzyme-Expasy ]   3.4.23.-3.4.23.- [ IntEnz-EBI ]   3.4.23.- [ BRENDA ]   3.4.23.- [ KEGG ]   
PhosPhoSitePlusQ53RT3
Domaine pattern : Prosite (Expaxy)ASP_PROT_RETROV (PS50175)    ASP_PROTEASE (PS00141)   
Domains : Interpro (EBI)Aspartic_peptidase_AS    Asprv1    Peptidase_A2_cat    Peptidase_aspartic_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ASPRV1
DMDM Disease mutations151516
Blocks (Seattle)ASPRV1
SuperfamilyQ53RT3
Human Protein AtlasENSG00000244617
Peptide AtlasQ53RT3
HPRD08683
IPIIPI00102281   
Protein Interaction databases
DIP (DOE-UCLA)Q53RT3
IntAct (EBI)Q53RT3
FunCoupENSG00000244617
BioGRIDASPRV1
STRING (EMBL)ASPRV1
ZODIACASPRV1
Ontologies - Pathways
QuickGOQ53RT3
Ontology : AmiGOaspartic-type endopeptidase activity  integral component of membrane  protein processing  skin development  
Ontology : EGO-EBIaspartic-type endopeptidase activity  integral component of membrane  protein processing  skin development  
NDEx NetworkASPRV1
Atlas of Cancer Signalling NetworkASPRV1
Wikipedia pathwaysASPRV1
Orthology - Evolution
OrthoDB151516
GeneTree (enSembl)ENSG00000244617
Phylogenetic Trees/Animal Genes : TreeFamASPRV1
HOVERGENQ53RT3
HOGENOMQ53RT3
Homologs : HomoloGeneASPRV1
Homology/Alignments : Family Browser (UCSC)ASPRV1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerASPRV1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ASPRV1
dbVarASPRV1
ClinVarASPRV1
1000_GenomesASPRV1 
Exome Variant ServerASPRV1
ExAC (Exome Aggregation Consortium)ASPRV1 (select the gene name)
Genetic variants : HAPMAP151516
Genomic Variants (DGV)ASPRV1 [DGVbeta]
DECIPHERASPRV1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisASPRV1 
Mutations
ICGC Data PortalASPRV1 
TCGA Data PortalASPRV1 
Broad Tumor PortalASPRV1
OASIS PortalASPRV1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICASPRV1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDASPRV1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ASPRV1
DgiDB (Drug Gene Interaction Database)ASPRV1
DoCM (Curated mutations)ASPRV1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ASPRV1 (select a term)
intoGenASPRV1
Cancer3DASPRV1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611765   
Orphanet
MedgenASPRV1
Genetic Testing Registry ASPRV1
NextProtQ53RT3 [Medical]
TSGene151516
GENETestsASPRV1
Target ValidationASPRV1
Huge Navigator ASPRV1 [HugePedia]
snp3D : Map Gene to Disease151516
BioCentury BCIQASPRV1
ClinGenASPRV1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD151516
Chemical/Pharm GKB GenePA162376919
Clinical trialASPRV1
Miscellaneous
canSAR (ICR)ASPRV1 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASPRV1
EVEXASPRV1
GoPubMedASPRV1
iHOPASPRV1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:24:40 CEST 2017

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