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ASUN (asunder spermatogenesis regulator)

Identity

Alias_namesC12orf11
chromosome 12 open reading frame 11
asunder, spermatogenesis regulator homolog (Drosphila)
Alias_symbol (synonym)FLJ10637
NET48
Mat89Bb
SPATA30
Other aliasGCT1
HGNC (Hugo) ASUN
LocusID (NCBI) 55726
Atlas_Id 60585
Location 12p11.23  [Link to chromosome band 12p11]
Location_base_pair Starts at 27058112 and ends at 27091254 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ASUN (12p11.23) / ASUN (12p11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ASUN   20174
Cards
Entrez_Gene (NCBI)ASUN  55726  asunder spermatogenesis regulator
AliasesC12orf11; GCT1; Mat89Bb; NET48; 
SPATA30
GeneCards (Weizmann)ASUN
Ensembl hg19 (Hinxton)ENSG00000064102 [Gene_View]  chr12:27058112-27091254 [Contig_View]  ASUN [Vega]
Ensembl hg38 (Hinxton)ENSG00000064102 [Gene_View]  chr12:27058112-27091254 [Contig_View]  ASUN [Vega]
ICGC DataPortalENSG00000064102
TCGA cBioPortalASUN
AceView (NCBI)ASUN
Genatlas (Paris)ASUN
WikiGenes55726
SOURCE (Princeton)ASUN
Genetics Home Reference (NIH)ASUN
Genomic and cartography
GoldenPath hg19 (UCSC)ASUN  -     chr12:27058112-27091254 -  12p11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ASUN  -     12p11.23   [Description]    (hg38-Dec_2013)
EnsemblASUN - 12p11.23 [CytoView hg19]  ASUN - 12p11.23 [CytoView hg38]
Mapping of homologs : NCBIASUN [Mapview hg19]  ASUN [Mapview hg38]
OMIM615079   
Gene and transcription
Genbank (Entrez)AF274950 AK001222 AK001492 AK001499 AK225336
RefSeq transcript (Entrez)NM_018164
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_009714 NW_004929383
Consensus coding sequences : CCDS (NCBI)ASUN
Cluster EST : UnigeneHs.505077 [ NCBI ]
CGAP (NCI)Hs.505077
Alternative Splicing GalleryENSG00000064102
Gene ExpressionASUN [ NCBI-GEO ]   ASUN [ EBI - ARRAY_EXPRESS ]   ASUN [ SEEK ]   ASUN [ MEM ]
Gene Expression Viewer (FireBrowse)ASUN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55726
GTEX Portal (Tissue expression)ASUN
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NVM9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NVM9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NVM9
Splice isoforms : SwissVarQ9NVM9
PhosPhoSitePlusQ9NVM9
Domains : Interpro (EBI)Cell_cycle_regulator_Mat89Bb   
Domain families : Pfam (Sanger)DUF2151 (PF10221)   
Domain families : Pfam (NCBI)pfam10221   
Conserved Domain (NCBI)ASUN
DMDM Disease mutations55726
Blocks (Seattle)ASUN
SuperfamilyQ9NVM9
Human Protein AtlasENSG00000064102
Peptide AtlasQ9NVM9
HPRD07689
IPIIPI00550986   IPI01015796   IPI00382466   IPI00182406   IPI01020739   IPI01021521   IPI01010799   IPI01009345   
Protein Interaction databases
DIP (DOE-UCLA)Q9NVM9
IntAct (EBI)Q9NVM9
FunCoupENSG00000064102
BioGRIDASUN
STRING (EMBL)ASUN
ZODIACASUN
Ontologies - Pathways
QuickGOQ9NVM9
Ontology : AmiGOprotein binding  nucleus  cytoplasm  cytoplasm  mitotic spindle organization  mitotic nuclear division  regulation of mitotic cell cycle  sperm motility  cell division  centrosome localization  regulation of fertilization  protein localization to nuclear envelope  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  cytoplasm  mitotic spindle organization  mitotic nuclear division  regulation of mitotic cell cycle  sperm motility  cell division  centrosome localization  regulation of fertilization  protein localization to nuclear envelope  
NDEx NetworkASUN
Atlas of Cancer Signalling NetworkASUN
Wikipedia pathwaysASUN
Orthology - Evolution
OrthoDB55726
GeneTree (enSembl)ENSG00000064102
Phylogenetic Trees/Animal Genes : TreeFamASUN
HOVERGENQ9NVM9
HOGENOMQ9NVM9
Homologs : HomoloGeneASUN
Homology/Alignments : Family Browser (UCSC)ASUN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerASUN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ASUN
dbVarASUN
ClinVarASUN
1000_GenomesASUN 
Exome Variant ServerASUN
ExAC (Exome Aggregation Consortium)ASUN (select the gene name)
Genetic variants : HAPMAP55726
Genomic Variants (DGV)ASUN [DGVbeta]
DECIPHER (Syndromes)12:27058112-27091254  ENSG00000064102
CONAN: Copy Number AnalysisASUN 
Mutations
ICGC Data PortalASUN 
TCGA Data PortalASUN 
Broad Tumor PortalASUN
OASIS PortalASUN [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDASUN
BioMutasearch ASUN
DgiDB (Drug Gene Interaction Database)ASUN
DoCM (Curated mutations)ASUN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ASUN (select a term)
intoGenASUN
Cancer3DASUN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615079   
Orphanet
MedgenASUN
Genetic Testing Registry ASUN
NextProtQ9NVM9 [Medical]
TSGene55726
GENETestsASUN
Huge Navigator ASUN [HugePedia]
snp3D : Map Gene to Disease55726
BioCentury BCIQASUN
ClinGenASUN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55726
Chemical/Pharm GKB GenePA134892469
Clinical trialASUN
Miscellaneous
canSAR (ICR)ASUN (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineASUN
EVEXASUN
GoPubMedASUN
iHOPASUN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:55:15 CET 2017

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