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ATE1-AS1 (ATE1 antisense RNA 1)

Identity

Alias_namesATE1 antisense RNA 1
ATE1 antisense RNA 1 (head to head)
Alias_symbol (synonym)ENST00000437593
Other alias-
HGNC (Hugo) ATE1-AS1
LocusID (NCBI) 100130887
Atlas_Id 60592
Location 10q26.13  [Link to chromosome band 10q26]
Location_base_pair Starts at 121928312 and ends at 121951965 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ATE1-AS1   49496
Cards
Entrez_Gene (NCBI)ATE1-AS1  100130887  ATE1 antisense RNA 1
Aliases
GeneCards (Weizmann)ATE1-AS1
Ensembl hg19 (Hinxton)ENSG00000226864 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226864 [Gene_View]  chr10:121928312-121951965 [Contig_View]  ATE1-AS1 [Vega]
ICGC DataPortalENSG00000226864
TCGA cBioPortalATE1-AS1
AceView (NCBI)ATE1-AS1
Genatlas (Paris)ATE1-AS1
WikiGenes100130887
SOURCE (Princeton)ATE1-AS1
Genetics Home Reference (NIH)ATE1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ATE1-AS1  -     chr10:121928312-121951965 +  10q26.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATE1-AS1  -     10q26.13   [Description]    (hg19-Feb_2009)
EnsemblATE1-AS1 - 10q26.13 [CytoView hg19]  ATE1-AS1 - 10q26.13 [CytoView hg38]
Mapping of homologs : NCBIATE1-AS1 [Mapview hg19]  ATE1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI634505 BF434328 BF513344
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ATE1-AS1
Cluster EST : UnigeneHs.650058 [ NCBI ]
CGAP (NCI)Hs.650058
Alternative Splicing GalleryENSG00000226864
Gene ExpressionATE1-AS1 [ NCBI-GEO ]   ATE1-AS1 [ EBI - ARRAY_EXPRESS ]   ATE1-AS1 [ SEEK ]   ATE1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ATE1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100130887
GTEX Portal (Tissue expression)ATE1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ATE1-AS1
DMDM Disease mutations100130887
Blocks (Seattle)ATE1-AS1
Human Protein AtlasENSG00000226864
Protein Interaction databases
FunCoupENSG00000226864
BioGRIDATE1-AS1
STRING (EMBL)ATE1-AS1
ZODIACATE1-AS1
Ontologies - Pathways
Huge Navigator ATE1-AS1 [HugePedia]
snp3D : Map Gene to Disease100130887
BioCentury BCIQATE1-AS1
ClinGenATE1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130887
Clinical trialATE1-AS1
Miscellaneous
canSAR (ICR)ATE1-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineATE1-AS1
EVEXATE1-AS1
GoPubMedATE1-AS1
iHOPATE1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:39:05 CEST 2017

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