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ATP11C (ATPase phospholipid transporting 11C)

Identity

Alias (NCBI)ATPIG
ATPIQ
HACXL
HGNC (Hugo) ATP11C
HGNC Alias symbATPIG
ATPIQ
HGNC Previous nameATPase, Class VI, type 11C
LocusID (NCBI) 286410
Atlas_Id 52394
Location Xq27.1  [Link to chromosome band Xq27]
Location_base_pair Starts at 139726348 and ends at 139832241 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ATP11C (Xq27.1) / ATP11C (Xq27.1)ATP11C (Xq27.1) / MALAT1 (11q13.1)ATP11C (Xq27.1) / PREX1 (20q13.13)
ATP11C (Xq27.1) / TMEM136 (11q23.3)TMEM136 (11q23.3) / ATP11C (Xq27.1)ATP11C Xq27.1 / PREX1 20q13.13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ATP11C   13554
Cards
Entrez_Gene (NCBI)ATP11C    ATPase phospholipid transporting 11C
AliasesATPIG; ATPIQ; HACXL
GeneCards (Weizmann)ATP11C
Ensembl hg19 (Hinxton)ENSG00000101974 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000101974 [Gene_View]  ENSG00000101974 [Sequence]  chrX:139726348-139832241 [Contig_View]  ATP11C [Vega]
ICGC DataPortalENSG00000101974
TCGA cBioPortalATP11C
AceView (NCBI)ATP11C
Genatlas (Paris)ATP11C
SOURCE (Princeton)ATP11C
Genetics Home Reference (NIH)ATP11C
Genomic and cartography
GoldenPath hg38 (UCSC)ATP11C  -     chrX:139726348-139832241 -  Xq27.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATP11C  -     Xq27.1   [Description]    (hg19-Feb_2009)
GoldenPathATP11C - Xq27.1 [CytoView hg19]  ATP11C - Xq27.1 [CytoView hg38]
ImmunoBaseENSG00000101974
Genome Data Viewer NCBIATP11C [Mapview hg19]  
OMIM300516   301015   
Gene and transcription
Genbank (Entrez)AA829385 AJ580093 AJ580094 AK091552 AK093835
RefSeq transcript (Entrez)NM_001010986 NM_001353810 NM_001353811 NM_001353812 NM_173694
Consensus coding sequences : CCDS (NCBI)ATP11C
Gene ExpressionATP11C [ NCBI-GEO ]   ATP11C [ EBI - ARRAY_EXPRESS ]   ATP11C [ SEEK ]   ATP11C [ MEM ]
Gene Expression Viewer (FireBrowse)ATP11C [ Firebrowse - Broad ]
GenevisibleExpression of ATP11C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286410
GTEX Portal (Tissue expression)ATP11C
Human Protein AtlasENSG00000101974-ATP11C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ATP11C
Human Protein Atlas [tissue]ENSG00000101974-ATP11C [tissue]
HPRD09814
Protein Interaction databases
BioGRIDATP11C
STRING (EMBL)ATP11C
ZODIACATP11C
Ontologies - Pathways
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXATP11C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:00:30 CEST 2021

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