ATP12A (ATPase, H+/K+ transporting, nongastric, alpha polypeptide)

Identity

Other names	ATP1AL1
Hugo	ATP12A
Location	13q11-q12.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	ATP12A
GDB	ATP12A
Entrez_Gene	ATP12A  479  ATPase, H+/K+ transporting, nongastric, alpha polypeptide
	Cards
GeneCards	ATP12A
Ensembl	ATP12A [Search_View]   ENSG00000075673 [Gene_View]
Genatlas	ATP12A
GeneLynx	ATP12A
eGenome	ATP12A
euGene	479
	Genomic and cartography
GoldenPath	ATP12A  -     chr13:24152695-24183917 +  13q12.12   [Description]    (hg18-March_2006)
Ensembl	ATP12A - 13q12.12 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ATP12A
	Gene and transcription
Genbank	AK292968 [ ENTREZ ]
Genbank	BC031609 [ ENTREZ ]
Genbank	CA450333 [ ENTREZ ]
Genbank	DB232979 [ ENTREZ ]
Genbank	M16797 [ ENTREZ ]
RefSeq	NM_001676 [ SRS ]    NM_001676 [ ENTREZ ]
RefSeq	AC_000056 [ SRS ]    AC_000056 [ ENTREZ ]
RefSeq	AC_000145 [ SRS ]    AC_000145 [ ENTREZ ]
RefSeq	NC_000013 [ SRS ]    NC_000013 [ ENTREZ ]
RefSeq	NT_024524 [ SRS ]    NT_024524 [ ENTREZ ]
RefSeq	NW_001838070 [ SRS ]    NW_001838070 [ ENTREZ ]
RefSeq	NW_925473 [ SRS ]    NW_925473 [ ENTREZ ]
AceView	ATP12A AceView - NCBI
Unigene	Hs.147111 [ SRS ]    Hs.147111 [ NCBI ]     HS147111 [ spliceNest ]
Fast-db	1133 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P54707 [ SRS]    P54707 [ EXPASY ]     P54707 [ INTERPRO ]
Prosite	PS00154 ATPASE_E1_E2 [ SRS ]    PS00154 ATPASE_E1_E2 [ Expasy ]
Interpro	IPR006069 ATPase_cat_a [ SRS ]    IPR006069 ATPase_cat_a [ EBI ]
Interpro	IPR005775 ATPase_cat_a_euk [ SRS ]    IPR005775 ATPase_cat_a_euk [ EBI ]
Interpro	IPR001757 ATPase_P [ SRS ]    IPR001757 ATPase_P [ EBI ]
Interpro	IPR006068 ATPase_P_cat_C [ SRS ]    IPR006068 ATPase_P_cat_C [ EBI ]
Interpro	IPR004014 ATPase_P_cat_N [ SRS ]    IPR004014 ATPase_P_cat_N [ EBI ]
Interpro	IPR005834 Dehalogen-like_hydro [ SRS ]    IPR005834 Dehalogen-like_hydro [ EBI ]
Interpro	IPR008250 E1-E2_ATPase_reg [ SRS ]    IPR008250 E1-E2_ATPase_reg [ EBI ]
CluSTr	P54707
Pfam	PF00689 Cation_ATPase_C [ SRS ]    PF00689 Cation_ATPase_C [ Sanger ]    pfam00689 [ NCBI-CDD ]
Pfam	PF00690 Cation_ATPase_N [ SRS ]    PF00690 Cation_ATPase_N [ Sanger ]    pfam00690 [ NCBI-CDD ]
Pfam	PF00122 E1-E2_ATPase [ SRS ]    PF00122 E1-E2_ATPase [ Sanger ]    pfam00122 [ NCBI-CDD ]
Pfam	PF00702 Hydrolase [ SRS ]    PF00702 Hydrolase [ Sanger ]    pfam00702 [ NCBI-CDD ]
Blocks	P54707
PDB	ATP12A [ SRS ]    ATP12A [ PdbSum ],   ATP12A [ IMB ]   ATP12A [ RSDB ]
HPRD	01667
	Protein Interaction databases
DIP	P54707
IntAct	P54707
	Polymorphism : SNP, mutations, diseases
OMIM	182360    [ map ]
GENECLINICS	182360
SNP	ATP12A [dbSNP-NCBI]
SNP	NM_001676 [SNP-NCI]
SNP	ATP12A [GeneSNPs - Utah]  ATP12A] [HGBASE - SRS]
HAPMAP	ATP12A [HAPMAP]
HGMD	ATP12A
	General knowledge
Family Browser	ATP12A [UCSC Family Browser]
SOURCE	NM_001676
SMD	Hs.147111
SAGE	Hs.147111
Enzyme	3.6.3.10 [ Enzyme-Expasy ]   3.6.3.10 [ Enzyme-SRS ]   3.6.3.10 [ IntEnz-EBI ]   3.6.3.10 [ BRENDA ]   3.6.3.10 [ KEGG ]   3.6.3.10 [ WIT ]
GO	nucleotide binding [Amigo]  nucleotide binding
GO	magnesium ion binding [Amigo]  magnesium ion binding
GO	ATP binding [Amigo]  ATP binding
GO	hydrogen:potassium-exchanging ATPase complex [Amigo]  hydrogen:potassium-exchanging ATPase complex
GO	potassium ion transport [Amigo]  potassium ion transport
GO	metabolic process [Amigo]  metabolic process
GO	hydrogen:potassium-exchanging ATPase activity [Amigo]  hydrogen:potassium-exchanging ATPase activity
GO	monovalent inorganic cation transmembrane transporter activity [Amigo]  monovalent inorganic cation transmembrane transporter activity
GO	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Amigo]  ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
GO	proton transport [Amigo]  proton transport
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	hydrolase activity [Amigo]  hydrolase activity
GO	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Amigo]  hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO	potassium ion binding [Amigo]  potassium ion binding
KEGG	Oxidative phosphorylation
PubGene	ATP12A
TreeFam	ATP12A
CTD	479 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ATP12A Related clones (RZPD - Berlin)
	PubMed
PubMed	15 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Jul 14 16:58:41 2008