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ATP5IF1 (ATP synthase inhibitory factor subunit 1)

Identity

Other aliasATPI
ATPIF1
ATPIP
IP
HGNC (Hugo) ATP5IF1
LocusID (NCBI) 93974
Atlas_Id 57371
Location 1p35.3  [Link to chromosome band 1p35]
Location_base_pair Starts at 28236091 and ends at 28238105 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ATP5IF1   871
Cards
Entrez_Gene (NCBI)ATP5IF1  93974  ATP synthase inhibitory factor subunit 1
AliasesATPI; ATPIF1; ATPIP; IP
GeneCards (Weizmann)ATP5IF1
Ensembl hg19 (Hinxton)ENSG00000130770 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130770 [Gene_View]  ENSG00000130770 [Sequence]  chr1:28236091-28238105 [Contig_View]  ATP5IF1 [Vega]
ICGC DataPortalENSG00000130770
TCGA cBioPortalATP5IF1
AceView (NCBI)ATP5IF1
Genatlas (Paris)ATP5IF1
WikiGenes93974
SOURCE (Princeton)ATP5IF1
Genetics Home Reference (NIH)ATP5IF1
Genomic and cartography
GoldenPath hg38 (UCSC)ATP5IF1  -     chr1:28236091-28238105 +  1p35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATP5IF1  -     1p35.3   [Description]    (hg19-Feb_2009)
EnsemblATP5IF1 - 1p35.3 [CytoView hg19]  ATP5IF1 - 1p35.3 [CytoView hg38]
Mapping of homologs : NCBIATP5IF1 [Mapview hg19]  ATP5IF1 [Mapview hg38]
OMIM614981   
Gene and transcription
Genbank (Entrez)AB029042 AF114836 AK000934 AK316600 AL050386
RefSeq transcript (Entrez)NM_016311 NM_178190 NM_178191
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ATP5IF1
Cluster EST : UnigeneHs.744914 [ NCBI ]
CGAP (NCI)Hs.744914
Alternative Splicing GalleryENSG00000130770
Gene ExpressionATP5IF1 [ NCBI-GEO ]   ATP5IF1 [ EBI - ARRAY_EXPRESS ]   ATP5IF1 [ SEEK ]   ATP5IF1 [ MEM ]
Gene Expression Viewer (FireBrowse)ATP5IF1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93974
GTEX Portal (Tissue expression)ATP5IF1
Human Protein AtlasENSG00000130770-ATP5IF1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UII2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UII2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UII2
Splice isoforms : SwissVarQ9UII2
PhosPhoSitePlusQ9UII2
Domains : Interpro (EBI)ATPase_inhibitor_mt   
Domain families : Pfam (Sanger)IATP (PF04568)   
Domain families : Pfam (NCBI)pfam04568   
Conserved Domain (NCBI)ATP5IF1
DMDM Disease mutations93974
Blocks (Seattle)ATP5IF1
SuperfamilyQ9UII2
Human Protein Atlas [tissue]ENSG00000130770-ATP5IF1 [tissue]
Peptide AtlasQ9UII2
IPIIPI00553153   IPI00377040   IPI00258804   IPI00974236   IPI00976608   
Protein Interaction databases
DIP (DOE-UCLA)Q9UII2
IntAct (EBI)Q9UII2
FunCoupENSG00000130770
BioGRIDATP5IF1
STRING (EMBL)ATP5IF1
ZODIACATP5IF1
Ontologies - Pathways
QuickGOQ9UII2
Ontology : AmiGOangiogenesis  negative regulation of endothelial cell proliferation  enzyme inhibitor activity  calmodulin binding  mitochondrion  mitochondrion  mitochondrion  mitochondrion  generation of precursor metabolites and energy  heme biosynthetic process  heme biosynthetic process  cell surface  enzyme binding  erythrocyte differentiation  negative regulation of ATPase activity  negative regulation of ATPase activity  ATPase inhibitor activity  ATPase inhibitor activity  ATPase inhibitor activity  ATPase inhibitor activity  protein homodimerization activity  protein homodimerization activity  angiostatin binding  protein-containing complex binding  ATPase binding  ATPase binding  ATPase binding  protein homooligomerization  protein homotetramerization  negative regulation of hydrolase activity  negative regulation of hydrolase activity  mitochondrial depolarization  reactive oxygen species metabolic process  positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  positive regulation of proteolysis involved in cellular protein catabolic process  regulation of protein targeting to mitochondrion  regulation of ATP metabolic process  positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization  
Ontology : EGO-EBIangiogenesis  negative regulation of endothelial cell proliferation  enzyme inhibitor activity  calmodulin binding  mitochondrion  mitochondrion  mitochondrion  mitochondrion  generation of precursor metabolites and energy  heme biosynthetic process  heme biosynthetic process  cell surface  enzyme binding  erythrocyte differentiation  negative regulation of ATPase activity  negative regulation of ATPase activity  ATPase inhibitor activity  ATPase inhibitor activity  ATPase inhibitor activity  ATPase inhibitor activity  protein homodimerization activity  protein homodimerization activity  angiostatin binding  protein-containing complex binding  ATPase binding  ATPase binding  ATPase binding  protein homooligomerization  protein homotetramerization  negative regulation of hydrolase activity  negative regulation of hydrolase activity  mitochondrial depolarization  reactive oxygen species metabolic process  positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  positive regulation of proteolysis involved in cellular protein catabolic process  regulation of protein targeting to mitochondrion  regulation of ATP metabolic process  positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization  
NDEx NetworkATP5IF1
Atlas of Cancer Signalling NetworkATP5IF1
Wikipedia pathwaysATP5IF1
Orthology - Evolution
OrthoDB93974
GeneTree (enSembl)ENSG00000130770
Phylogenetic Trees/Animal Genes : TreeFamATP5IF1
HOVERGENQ9UII2
HOGENOMQ9UII2
Homologs : HomoloGeneATP5IF1
Homology/Alignments : Family Browser (UCSC)ATP5IF1
Gene fusions - Rearrangements
Fusion : QuiverATP5IF1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerATP5IF1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ATP5IF1
dbVarATP5IF1
ClinVarATP5IF1
1000_GenomesATP5IF1 
Exome Variant ServerATP5IF1
ExAC (Exome Aggregation Consortium)ENSG00000130770
GNOMAD BrowserENSG00000130770
Varsome BrowserATP5IF1
Genetic variants : HAPMAP93974
Genomic Variants (DGV)ATP5IF1 [DGVbeta]
DECIPHERATP5IF1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisATP5IF1 
Mutations
ICGC Data PortalATP5IF1 
TCGA Data PortalATP5IF1 
Broad Tumor PortalATP5IF1
OASIS PortalATP5IF1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDATP5IF1
BioMutasearch ATP5IF1
DgiDB (Drug Gene Interaction Database)ATP5IF1
DoCM (Curated mutations)ATP5IF1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ATP5IF1 (select a term)
intoGenATP5IF1
Cancer3DATP5IF1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614981   
Orphanet
DisGeNETATP5IF1
MedgenATP5IF1
Genetic Testing Registry ATP5IF1
NextProtQ9UII2 [Medical]
TSGene93974
GENETestsATP5IF1
Target ValidationATP5IF1
Huge Navigator ATP5IF1 [HugePedia]
snp3D : Map Gene to Disease93974
BioCentury BCIQATP5IF1
ClinGenATP5IF1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93974
Chemical/Pharm GKB GenePA25173
Clinical trialATP5IF1
Miscellaneous
canSAR (ICR)ATP5IF1 (select the gene name)
Probes
Litterature
PubMed58 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineATP5IF1
EVEXATP5IF1
GoPubMedATP5IF1
iHOPATP5IF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 10:53:03 CET 2018

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