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ATP5L2 (ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2)

Identity

Alias_namesATP5K2
ATP synthase, H+ transporting, mitochondrial F1F0, subunit g
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g, isoform 2
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G2 pseudogene
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G2
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2
Alias_symbol (synonym)dJ222E13.5
Other alias
HGNC (Hugo) ATP5L2
LocusID (NCBI) 267020
Atlas_Id 60631
Location 22q13.2  [Link to chromosome band 22q13]
Location_base_pair Starts at 43035809 and ends at 43036607 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ATP5L2   13213
Cards
Entrez_Gene (NCBI)ATP5L2  267020  ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2
AliasesATP5K2
GeneCards (Weizmann)ATP5L2
Ensembl hg19 (Hinxton)ENSG00000249222 [Gene_View]  chr22:43035809-43036607 [Contig_View]  ATP5L2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000249222 [Gene_View]  chr22:43035809-43036607 [Contig_View]  ATP5L2 [Vega]
ICGC DataPortalENSG00000249222
TCGA cBioPortalATP5L2
AceView (NCBI)ATP5L2
Genatlas (Paris)ATP5L2
WikiGenes267020
SOURCE (Princeton)ATP5L2
Genetics Home Reference (NIH)ATP5L2
Genomic and cartography
GoldenPath hg19 (UCSC)ATP5L2  -     chr22:43035809-43036607 -  22q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ATP5L2  -     22q13.2   [Description]    (hg38-Dec_2013)
EnsemblATP5L2 - 22q13.2 [CytoView hg19]  ATP5L2 - 22q13.2 [CytoView hg38]
Mapping of homologs : NCBIATP5L2 [Mapview hg19]  ATP5L2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF092923 BC093719 BC093721
RefSeq transcript (Entrez)NM_001165877
RefSeq genomic (Entrez)NC_000022 NC_018933 NG_004718 NG_012194 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)ATP5L2
Cluster EST : UnigeneHs.664737 [ NCBI ]
CGAP (NCI)Hs.664737
Alternative Splicing GalleryENSG00000249222
Gene ExpressionATP5L2 [ NCBI-GEO ]   ATP5L2 [ EBI - ARRAY_EXPRESS ]   ATP5L2 [ SEEK ]   ATP5L2 [ MEM ]
Gene Expression Viewer (FireBrowse)ATP5L2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)267020
GTEX Portal (Tissue expression)ATP5L2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z4Y8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z4Y8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z4Y8
Splice isoforms : SwissVarQ7Z4Y8
PhosPhoSitePlusQ7Z4Y8
Domains : Interpro (EBI)ATP-Synthase_su_G_mt_met    ATPase_F0-cplx_gsu_mt   
Domain families : Pfam (Sanger)ATP-synt_G (PF04718)   
Domain families : Pfam (NCBI)pfam04718   
Conserved Domain (NCBI)ATP5L2
DMDM Disease mutations267020
Blocks (Seattle)ATP5L2
SuperfamilyQ7Z4Y8
Human Protein AtlasENSG00000249222
Peptide AtlasQ7Z4Y8
IPIIPI00385203   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z4Y8
IntAct (EBI)Q7Z4Y8
FunCoupENSG00000249222
BioGRIDATP5L2
STRING (EMBL)ATP5L2
ZODIACATP5L2
Ontologies - Pathways
QuickGOQ7Z4Y8
Ontology : AmiGOmitochondrial proton-transporting ATP synthase complex, coupling factor F(o)  hydrogen ion transmembrane transporter activity  ATP synthesis coupled proton transport  
Ontology : EGO-EBImitochondrial proton-transporting ATP synthase complex, coupling factor F(o)  hydrogen ion transmembrane transporter activity  ATP synthesis coupled proton transport  
NDEx NetworkATP5L2
Atlas of Cancer Signalling NetworkATP5L2
Wikipedia pathwaysATP5L2
Orthology - Evolution
OrthoDB267020
GeneTree (enSembl)ENSG00000249222
Phylogenetic Trees/Animal Genes : TreeFamATP5L2
HOVERGENQ7Z4Y8
HOGENOMQ7Z4Y8
Homologs : HomoloGeneATP5L2
Homology/Alignments : Family Browser (UCSC)ATP5L2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerATP5L2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ATP5L2
dbVarATP5L2
ClinVarATP5L2
1000_GenomesATP5L2 
Exome Variant ServerATP5L2
ExAC (Exome Aggregation Consortium)ATP5L2 (select the gene name)
Genetic variants : HAPMAP267020
Genomic Variants (DGV)ATP5L2 [DGVbeta]
DECIPHER (Syndromes)22:43035809-43036607  ENSG00000249222
CONAN: Copy Number AnalysisATP5L2 
Mutations
ICGC Data PortalATP5L2 
TCGA Data PortalATP5L2 
Broad Tumor PortalATP5L2
OASIS PortalATP5L2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICATP5L2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDATP5L2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ATP5L2
DgiDB (Drug Gene Interaction Database)ATP5L2
DoCM (Curated mutations)ATP5L2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ATP5L2 (select a term)
intoGenATP5L2
Cancer3DATP5L2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenATP5L2
Genetic Testing Registry ATP5L2
NextProtQ7Z4Y8 [Medical]
TSGene267020
GENETestsATP5L2
Huge Navigator ATP5L2 [HugePedia]
snp3D : Map Gene to Disease267020
BioCentury BCIQATP5L2
ClinGenATP5L2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD267020
Chemical/Pharm GKB GenePA134948694
Clinical trialATP5L2
Miscellaneous
canSAR (ICR)ATP5L2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineATP5L2
EVEXATP5L2
GoPubMedATP5L2
iHOPATP5L2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:55:24 CET 2017

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