Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ATP5MG (ATP synthase membrane subunit g)

Identity

Alias (NCBI)ATP5JG
ATP5L
HGNC (Hugo) ATP5MG
LocusID (NCBI) 10632
Atlas_Id 80458
Location 11q23.3  [Link to chromosome band 11q23]
Location_base_pair Starts at 118401389 and ends at 118409847 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)ATP5MG   14247
Cards
Entrez_Gene (NCBI)ATP5MG    ATP synthase membrane subunit g
AliasesATP5JG; ATP5L
GeneCards (Weizmann)ATP5MG
Ensembl hg19 (Hinxton)ENSG00000167283 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167283 [Gene_View]  ENSG00000167283 [Sequence]  chr11:118401389-118409847 [Contig_View]  ATP5MG [Vega]
ICGC DataPortalENSG00000167283
TCGA cBioPortalATP5MG
AceView (NCBI)ATP5MG
Genatlas (Paris)ATP5MG
SOURCE (Princeton)ATP5MG
Genetics Home Reference (NIH)ATP5MG
Genomic and cartography
GoldenPath hg38 (UCSC)ATP5MG  -     chr11:118401389-118409847 +  11q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ATP5MG  -     11q23.3   [Description]    (hg19-Feb_2009)
GoldenPathATP5MG - 11q23.3 [CytoView hg19]  ATP5MG - 11q23.3 [CytoView hg38]
ImmunoBaseENSG00000167283
genome Data Viewer NCBIATP5MG [Mapview hg19]  
OMIM617473   
Gene and transcription
Genbank (Entrez)AA258888 AF070655 AF087846 AF092124 AI337729
RefSeq transcript (Entrez)NM_006476
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ATP5MG
Alternative Splicing GalleryENSG00000167283
Gene ExpressionATP5MG [ NCBI-GEO ]   ATP5MG [ EBI - ARRAY_EXPRESS ]   ATP5MG [ SEEK ]   ATP5MG [ MEM ]
Gene Expression Viewer (FireBrowse)ATP5MG [ Firebrowse - Broad ]
GenevisibleExpression of ATP5MG in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10632
GTEX Portal (Tissue expression)ATP5MG
Human Protein AtlasENSG00000167283-ATP5MG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75964   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75964  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75964
Splice isoforms : SwissVarO75964
PhosPhoSitePlusO75964
Domains : Interpro (EBI)ATP_synth_F0_gsu_mt    ATP_synth_su_G_mt_met   
Domain families : Pfam (Sanger)ATP-synt_G (PF04718)   
Domain families : Pfam (NCBI)pfam04718   
Conserved Domain (NCBI)ATP5MG
Blocks (Seattle)ATP5MG
SuperfamilyO75964
Human Protein Atlas [tissue]ENSG00000167283-ATP5MG [tissue]
Peptide AtlasO75964
IPIIPI00027448   IPI00983379   
Protein Interaction databases
DIP (DOE-UCLA)O75964
IntAct (EBI)O75964
BioGRIDATP5MG
STRING (EMBL)ATP5MG
ZODIACATP5MG
Ontologies - Pathways
QuickGOO75964
Ontology : AmiGOmitochondrial proton-transporting ATP synthase complex, coupling factor F(o)  protein binding  mitochondrion  mitochondrial inner membrane  mitochondrial proton-transporting ATP synthase complex  ATP biosynthetic process  ATP synthesis coupled proton transport  ATPase activity  transmembrane transporter activity  cristae formation  mitochondrial ATP synthesis coupled proton transport  mitochondrial ATP synthesis coupled proton transport  proton-transporting ATP synthase activity, rotational mechanism  
Ontology : EGO-EBImitochondrial proton-transporting ATP synthase complex, coupling factor F(o)  protein binding  mitochondrion  mitochondrial inner membrane  mitochondrial proton-transporting ATP synthase complex  ATP biosynthetic process  ATP synthesis coupled proton transport  ATPase activity  transmembrane transporter activity  cristae formation  mitochondrial ATP synthesis coupled proton transport  mitochondrial ATP synthesis coupled proton transport  proton-transporting ATP synthase activity, rotational mechanism  
NDEx NetworkATP5MG
Atlas of Cancer Signalling NetworkATP5MG
Wikipedia pathwaysATP5MG
Orthology - Evolution
OrthoDB10632
GeneTree (enSembl)ENSG00000167283
Phylogenetic Trees/Animal Genes : TreeFamATP5MG
HOGENOMO75964
Homologs : HomoloGeneATP5MG
Homology/Alignments : Family Browser (UCSC)ATP5MG
Gene fusions - Rearrangements
Fusion : QuiverATP5MG
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerATP5MG [hg38]
dbVarATP5MG
ClinVarATP5MG
MonarchATP5MG
1000_GenomesATP5MG 
Exome Variant ServerATP5MG
GNOMAD BrowserENSG00000167283
Varsome BrowserATP5MG
Genomic Variants (DGV)ATP5MG [DGVbeta]
DECIPHERATP5MG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisATP5MG 
Mutations
ICGC Data PortalATP5MG 
TCGA Data PortalATP5MG 
Broad Tumor PortalATP5MG
OASIS PortalATP5MG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICATP5MG  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DATP5MG
Mutations and Diseases : HGMDATP5MG
BioMutasearch ATP5MG
DgiDB (Drug Gene Interaction Database)ATP5MG
DoCM (Curated mutations)ATP5MG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ATP5MG (select a term)
intoGenATP5MG
Cancer3DATP5MG(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617473   
Orphanet
DisGeNETATP5MG
MedgenATP5MG
Genetic Testing Registry ATP5MG
NextProtO75964 [Medical]
GENETestsATP5MG
Target ValidationATP5MG
Huge Navigator ATP5MG [HugePedia]
ClinGenATP5MG
Clinical trials, drugs, therapy
MyCancerGenomeATP5MG
Protein Interactions : CTD
Pharm GKB GenePA25143
Clinical trialATP5MG
Miscellaneous
canSAR (ICR)ATP5MG (select the gene name)
HarmonizomeATP5MG
DataMed IndexATP5MG
Probes
Litterature
PubMed45 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineATP5MG
EVEXATP5MG
GoPubMedATP5MG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 16:46:38 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.